TreeWAS – Variant ID: rs6922269

Hospitalization Episode Statistics (HES)

Self-Reported Statistics (SRS)

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Results table

Term	Risk posterior probability	No effect posterior probability	Protective posterior probability
C44.6 Skin of upper limb, including shoulder	0.000	0.978	0.022
M23.30 Other meniscus derangements (Multiple sites)	0.000	0.987	0.013
H53.9 Visual disturbance, unspecified	0.000	0.991	0.009
M45.X9 Ankylosing spondylitis (Site unspecified)	0.000	0.992	0.008
Q61.0 Congenital single renal cyst	0.008	0.992	0.000
Q28.2 Arteriovenous malformation of cerebral vessels	0.008	0.992	0.000
Q61 Cystic kidney disease	0.008	0.992	0.000
Q61.3 Polycystic kidney, unspecified	0.007	0.993	0.000
D03.5 Melanoma in situ of trunk	0.007	0.993	0.000
D03 Melanoma in situ	0.007	0.993	0.000
D03.7 Melanoma in situ of lower limb, including hip	0.006	0.994	0.000
Q28 Other congenital malformations of circulatory system	0.006	0.994	0.000
Q61.9 Cystic kidney disease, unspecified	0.006	0.994	0.000
N60.4 Mammary duct ectasia	0.000	0.994	0.006
Q61.4 Renal dysplasia	0.006	0.994	0.000
M23.36 Other meniscus derangements (Other and unspecified lateral meniscus)	0.000	0.994	0.006
D03.4 Melanoma in situ of scalp and neck	0.006	0.994	0.000
D03.2 Melanoma in situ of ear and external auricular canal	0.006	0.994	0.000
D03.6 Melanoma in situ of upper limb, including shoulder	0.006	0.994	0.000
Q61.8 Other cystic kidney diseases	0.006	0.994	0.000
Q61.1 Polycystic kidney, infantile type	0.006	0.994	0.000
Q61.5 Medullary cystic kidney	0.005	0.995	0.000
Q28.0 Arteriovenous malformation of precerebral vessels	0.005	0.995	0.000
Q61.2 Polycystic kidney, adult type	0.005	0.995	0.000
Q20-Q28 Congenital malformations of the circulatory system	0.005	0.995	0.000
C25.9 Pancreas, unspecified	0.000	0.995	0.005
D03.1 Melanoma in situ of eyelid, including canthus	0.005	0.995	0.000
H53.1 Subjective visual disturbances	0.000	0.995	0.005
E53.8 Deficiency of other specified B group vitamins	0.000	0.995	0.005
Q60-Q64 Congenital malformations of the urinary system	0.005	0.995	0.000
C45.9 Mesothelioma, unspecified	0.005	0.995	0.000
H53.4 Visual field defects	0.000	0.995	0.005
M23.3 Other meniscus derangements	0.000	0.995	0.005
C45.0 Mesothelioma of pleura	0.005	0.995	0.000
C45 Mesothelioma	0.005	0.995	0.000
C45.7 Mesothelioma of other sites	0.005	0.995	0.000
R10.2 Pelvic and perineal pain	0.000	0.995	0.005
D03.9 Melanoma in situ, unspecified	0.005	0.995	0.000
D03.8 Melanoma in situ of other sites	0.005	0.995	0.000
D03.0 Melanoma in situ of lip	0.005	0.995	0.000
C25.0 Head of pancreas	0.000	0.995	0.005
Q23 Congenital malformations of aortic and mitral valves	0.005	0.995	0.000
Q28.9 Congenital malformation of circulatory system, unspecified	0.005	0.995	0.000
Q28.8 Other specified congenital malformations of circulatory system	0.005	0.995	0.000
Q28.3 Other malformations of cerebral vessels	0.005	0.995	0.000
Q28.1 Other malformations of precerebral vessels	0.005	0.995	0.000
H53 Visual disturbances	0.000	0.995	0.005
G82.4 Spastic tetraplegia	0.000	0.995	0.005
K83.1 Obstruction of bile duct	0.000	0.995	0.005
C09.9 Tonsil, unspecified	0.005	0.995	0.000
Y60.0 During surgical operation	0.000	0.995	0.005
Q25 Congenital malformations of great arteries	0.004	0.995	0.000
G82 Paraplegia and tetraplegia	0.000	0.995	0.005
Q22 Congenital malformations of pulmonary and tricuspid valves	0.004	0.996	0.000
Z87.7 Personal history of congenital malformations, deformations and chromosomal abnormalities	0.004	0.996	0.000
M23.34 Other meniscus derangements (Lateral collateral ligament or Anterior horn of lateral meniscus)	0.000	0.996	0.004
Q23.0 Congenital stenosis of aortic valve	0.004	0.996	0.000
Chapter XVII Congenital malformations, deformations and chromosomal abnormalities	0.004	0.996	0.000
Q25.3 Stenosis of aorta	0.004	0.996	0.000
Q23.3 Congenital mitral insufficiency	0.004	0.996	0.000
G82.5 Tetraplegia, unspecified	0.000	0.996	0.004
G82.2 Paraplegia, unspecified	0.000	0.996	0.004
C25 Malignant neoplasm of pancreas	0.000	0.996	0.004
K04.5 Chronic apical periodontitis	0.000	0.996	0.004
Q38.7 Pharyngeal pouch	0.004	0.996	0.000
Q38 Other congenital malformations of tongue, mouth and pharynx	0.004	0.996	0.000
Q38-Q45 Other congenital malformations of the digestive system	0.004	0.996	0.000
Q26 Congenital malformations of great veins	0.004	0.996	0.000
Q20 Congenital malformations of cardiac chambers and connexions	0.004	0.996	0.000
G82.1 Spastic paraplegia	0.000	0.996	0.004
Q62 Congenital obstructive defects of renal pelvis and congenital malformations of ureter	0.004	0.996	0.000
M23.31 Other meniscus derangements (Anterior cruciate ligament or Anterior horn of medial meniscus)	0.000	0.996	0.004
Q43.0 Meckel's diverticulum	0.000	0.996	0.004
N95.8 Other specified menopausal and perimenopausal disorders	0.004	0.996	0.000
M23.37 Other meniscus derangements-Capsular lig	0.000	0.996	0.004
Q24 Other congenital malformations of heart	0.004	0.996	0.000
C45.2 Mesothelioma of pericardium	0.004	0.996	0.000
C45.1 Mesothelioma of peritoneum	0.004	0.996	0.000
Z36.3 Antenatal screening for malformations using ultrasound and other physical methods	0.000	0.996	0.004
Q54 Hypospadias	0.004	0.996	0.000
Q25.1 Coarctation of aorta	0.004	0.996	0.000
Q23.1 Congenital insufficiency of aortic valve	0.004	0.996	0.000
Q23.9 Congenital malformation of aortic and mitral valves, unspecified	0.004	0.996	0.000
Q23.8 Other congenital malformations of aortic and mitral valves	0.004	0.996	0.000
Q23.4 Hypoplastic left heart syndrome	0.004	0.996	0.000
Q23.2 Congenital mitral stenosis	0.004	0.996	0.000
C25.2 Tail of pancreas	0.000	0.996	0.004
Q44 Congenital malformations of gallbladder, bile ducts and liver	0.004	0.996	0.000
Q54.1 Hypospadias, penile	0.004	0.996	0.000
H53.6 Night blindness	0.000	0.996	0.004
H53.5 Colour vision deficiencies	0.000	0.996	0.004
H53.3 Other disorders of binocular vision	0.000	0.996	0.004
Q54.9 Hypospadias, unspecified	0.004	0.996	0.000
Q22.5 Ebstein's anomaly	0.004	0.996	0.000
Q64 Other congenital malformations of urinary system	0.004	0.996	0.000
C09 Malignant neoplasm of tonsil	0.004	0.996	0.000
Q90-Q99 Chromosomal abnormalities, not elsewhere classified	0.003	0.996	0.000
Q80-Q89 Other congenital malformations	0.004	0.996	0.000
Q25.9 Congenital malformation of great arteries, unspecified	0.003	0.996	0.000
Q25.8 Other congenital malformations of great arteries	0.003	0.996	0.000
Q25.7 Other congenital malformations of pulmonary artery	0.003	0.996	0.000
Q25.5 Atresia of pulmonary artery	0.003	0.996	0.000
Q25.2 Atresia of aorta	0.003	0.996	0.000
G82.3 Flaccid tetraplegia	0.000	0.996	0.003
G82.0 Flaccid paraplegia	0.000	0.996	0.003
Q63 Other congenital malformations of kidney	0.003	0.997	0.000
M23.39 Other meniscus derangements (Unspecified ligament or Unspecified meniscus)	0.000	0.997	0.003
Q60 Renal agenesis and other reduction defects of kidney	0.003	0.997	0.000
Q25.0 Patent ductus arteriosus	0.003	0.997	0.000
Q22.9 Congenital malformation of tricuspid valve, unspecified	0.003	0.997	0.000
Q22.8 Other congenital malformations of tricuspid valve	0.003	0.997	0.000
Q22.6 Hypoplastic right heart syndrome	0.003	0.997	0.000
Q22.4 Congenital tricuspid stenosis	0.003	0.997	0.000
Q22.3 Other congenital malformations of pulmonary valve	0.003	0.997	0.000
Q22.2 Congenital pulmonary valve insufficiency	0.003	0.997	0.000
Q22.1 Congenital pulmonary valve stenosis	0.003	0.997	0.000
Q22.0 Pulmonary valve atresia	0.003	0.997	0.000
Q50-Q56 Congenital malformations of genital organs	0.003	0.997	0.000
M45 Ankylosing spondylitis	0.000	0.997	0.003
Q35-Q37 Cleft lip and cleft palate	0.003	0.997	0.000
Q30-Q34 Congenital malformations of the respiratory system	0.003	0.997	0.000
K14.9 Disease of tongue, unspecified	0.003	0.997	0.000
Q38.0 Congenital malformations of lips, not elsewhere classified	0.003	0.997	0.000
Q44.6 Cystic disease of liver	0.003	0.997	0.000
Q44.5 Other congenital malformations of bile ducts	0.003	0.997	0.000
M80.98 Unspecified osteoporosis with pathological fracture (Other)	0.003	0.997	0.000
D03.3 Melanoma in situ of other and unspecified parts of face	0.003	0.997	0.000
Q62.2 Congenital megaloureter	0.003	0.997	0.000
X51.9 Unspecified place	0.003	0.997	0.000
Q89 Other congenital malformations, not elsewhere classified	0.003	0.997	0.000
Q25.6 Stenosis of pulmonary artery	0.003	0.997	0.000
Q43 Other congenital malformations of intestine	0.003	0.997	0.001
C25.8 Overlapping lesion of pancreas	0.000	0.997	0.003
C25.7 Other parts of pancreas	0.000	0.997	0.003
C25.4 Endocrine pancreas	0.000	0.997	0.003
Q25.4 Other congenital malformations of aorta	0.003	0.997	0.000
Q85 Phakomatoses, not elsewhere classified	0.003	0.997	0.000
Q24.5 Malformation of coronary vessels	0.003	0.997	0.000
Q38.8 Other congenital malformations of pharynx	0.003	0.997	0.000
Q38.6 Other congenital malformations of mouth	0.003	0.997	0.000
Q38.5 Congenital malformations of palate, not elsewhere classified	0.003	0.997	0.000
Q38.4 Congenital malformations of salivary glands and ducts	0.003	0.997	0.000
Q38.3 Other congenital malformations of tongue	0.003	0.997	0.000
Q38.2 Macroglossia	0.003	0.997	0.000
Q38.1 Ankyloglossia	0.003	0.997	0.000
Q42 Congenital absence, atresia and stenosis of large intestine	0.003	0.997	0.000
Q41 Congenital absence, atresia and stenosis of small intestine	0.003	0.997	0.000
Q10-Q18 Congenital malformations of eye, ear, face and neck	0.003	0.997	0.000
M24.16 Other articular cartilage disorders (Lower leg)	0.000	0.997	0.003
Q20.9 Congenital malformation of cardiac chambers and connexions, unspecified	0.003	0.997	0.000
Q20.8 Other congenital malformations of cardiac chambers and connexions	0.003	0.997	0.000
Q20.6 Isomerism of atrial appendages	0.003	0.997	0.000
Q20.5 Discordant atrioventricular connexion	0.003	0.997	0.000
Q20.4 Double inlet ventricle	0.003	0.997	0.000
Q20.3 Discordant ventriculoarterial connexion	0.003	0.997	0.000
Q20.2 Double outlet left ventricle	0.003	0.997	0.000
Q20.1 Double outlet right ventricle	0.003	0.997	0.000
Q20.0 Common arterial trunk	0.003	0.997	0.000
Q26.9 Congenital malformation of great vein, unspecified	0.003	0.997	0.000
Q26.8 Other congenital malformations of great veins	0.003	0.997	0.000
Q26.6 Portal vein-hepatic artery fistula	0.003	0.997	0.000
Q26.5 Anomalous portal venous connexion	0.003	0.997	0.000
Q26.4 Anomalous pulmonary venous connexion, unspecified	0.003	0.997	0.000
Q26.3 Partial anomalous pulmonary venous connexion	0.003	0.997	0.000
Q26.2 Total anomalous pulmonary venous connexion	0.003	0.997	0.000
Q26.1 Persistent left superior vena cava	0.003	0.997	0.000
Q26.0 Congenital stenosis of vena cava	0.003	0.997	0.000
Q62.8 Other congenital malformations of ureter	0.003	0.997	0.000
Q62.7 Congenital vesico-uretero-renal reflux	0.003	0.997	0.000
Q62.6 Malposition of ureter	0.003	0.997	0.000
Q62.4 Agenesis of ureter	0.003	0.997	0.000
Q62.3 Other obstructive defects of renal pelvis and ureter	0.003	0.997	0.000
Q62.1 Atresia and stenosis of ureter	0.003	0.997	0.000
Q62.0 Congenital hydronephrosis	0.003	0.997	0.000
Q85.0 Neurofibromatosis (nonmalignant)	0.003	0.997	0.000
Q24.9 Congenital malformation of the heart, unspecified	0.003	0.997	0.000
Q62.5 Duplication of ureter	0.003	0.997	0.000
Q21 Congenital malformations of cardiac septa	0.003	0.997	0.000
Q24.6 Congenital heart block	0.003	0.997	0.000
Q24.4 Congenital subaortic stenosis	0.003	0.997	0.000
Q24.3 Pulmonary infundibular stenosis	0.003	0.997	0.000
Q24.2 Cor triatriatum	0.003	0.997	0.000
Q24.1 Levocardia	0.003	0.997	0.000
Q45 Other congenital malformations of digestive system	0.003	0.997	0.000
Q54.8 Other hypospadias	0.003	0.997	0.000
Q54.4 Congenital chordee	0.003	0.997	0.000
Q54.3 Hypospadias, perineal	0.003	0.997	0.000
Q54.2 Hypospadias, penoscrotal	0.003	0.997	0.000
Q40 Other congenital malformations of upper alimentary tract	0.003	0.997	0.000
Q24.0 Dextrocardia	0.003	0.997	0.000
Q54.0 Hypospadias, balanic	0.003	0.997	0.000
Q64.7 Other congenital malformations of bladder and urethra	0.003	0.997	0.000
Q89.2 Congenital malformations of other endocrine glands	0.003	0.997	0.000
Q44.7 Other congenital malformations of liver	0.003	0.997	0.000
Q44.4 Choledochal cyst	0.003	0.997	0.000
Q44.3 Congenital stenosis and stricture of bile ducts	0.003	0.997	0.000
Q44.2 Atresia of bile ducts	0.003	0.997	0.000
Q44.1 Other congenital malformations of gallbladder	0.003	0.997	0.000
Q44.0 Agenesis, aplasia and hypoplasia of gallbladder	0.003	0.997	0.000
Q98 Other sex chromosome abnormalities, male phenotype, not elsewhere classified	0.003	0.997	0.000
Z36.0 Antenatal screening for chromosomal anomalies	0.000	0.997	0.003
C25.1 Body of pancreas	0.000	0.997	0.003
Z36 Antenatal screening	0.000	0.997	0.003
Q64.9 Congenital malformation of urinary system, unspecified	0.003	0.997	0.000
Q64.8 Other specified congenital malformations of urinary system	0.003	0.997	0.000
Q64.6 Congenital diverticulum of bladder	0.003	0.997	0.000
Q64.5 Congenital absence of bladder and urethra	0.003	0.997	0.000
Q64.4 Malformation of urachus	0.003	0.997	0.000
Q64.2 Congenital posterior urethral valves	0.003	0.997	0.000
Q64.1 Exstrophy of urinary bladder	0.003	0.997	0.000
Q64.0 Epispadias	0.003	0.997	0.000
Q27 Other congenital malformations of peripheral vascular system	0.002	0.997	0.000
Q99 Other chromosome abnormalities, not elsewhere classified	0.003	0.997	0.000
C09.8 Overlapping lesion of tonsil	0.003	0.997	0.000
C09.1 Tonsillar pillar (anterior) (posterior)	0.003	0.997	0.000
C09.0 Tonsillar fossa	0.003	0.997	0.000
Q11 Anophthalmos, microphthalmos and macrophthalmos	0.003	0.997	0.000
Q43.3 Congenital malformations of intestinal fixation	0.002	0.997	0.000
Q97 Other sex chromosome abnormalities, female phenotype, not elsewhere classified	0.003	0.997	0.000
Q95 Balanced rearrangements and structural markers, not elsewhere classified	0.003	0.997	0.000
Q93 Monosomies and deletions from the autosomes, not elsewhere classified	0.003	0.997	0.000
Q92 Other trisomies and partial trisomies of the autosomes, not elsewhere classified	0.003	0.997	0.000
Q91 Edwards' syndrome and Patau's syndrome	0.003	0.997	0.000
Q90 Down's syndrome	0.003	0.997	0.000
C00-C14 Malignant neoplasms of lip, oral cavity and pharynx	0.003	0.997	0.000
Q86 Congenital malformation syndromes due to known exogenous causes, not elsewhere classified	0.003	0.997	0.000
Q84 Other congenital malformations of integument	0.003	0.997	0.000
Q81 Epidermolysis bullosa	0.003	0.997	0.000
Q80 Congenital ichthyosis	0.003	0.997	0.000
Q63.1 Lobulated, fused and horseshoe kidney	0.003	0.997	0.000
Q96 Turner's syndrome	0.003	0.997	0.000
Q89.3 Situs inversus	0.003	0.997	0.000
C01 Malignant neoplasm of base of tongue	0.003	0.997	0.000
Q53 Undescended testicle	0.003	0.997	0.000
Q63.9 Congenital malformation of kidney, unspecified	0.003	0.997	0.000
Q63.8 Other specified congenital malformations of kidney	0.003	0.997	0.000
Q63.3 Hyperplastic and giant kidney	0.003	0.997	0.000
Q60.6 Potter's syndrome	0.003	0.997	0.000
Q60.5 Renal hypoplasia, unspecified	0.003	0.997	0.000
Q60.4 Renal hypoplasia, bilateral	0.003	0.997	0.000
Q60.3 Renal hypoplasia, unilateral	0.003	0.997	0.000
Q60.1 Renal agenesis, bilateral	0.003	0.997	0.000
Z36.1 Antenatal screening for raised alphafetoprotein level	0.000	0.997	0.003
M45.X8 Ankylosing spondylitis (Sacral and sacrococcygeal region)	0.000	0.997	0.003
M45.X7 Ankylosing spondylitis (Lumbosacral region)	0.000	0.997	0.003
M45.X6 Ankylosing spondylitis (Lumbar region)	0.000	0.997	0.003
M45.X5 Ankylosing spondylitis (Thoracolumbar region)	0.000	0.997	0.003
M45.X4 Ankylosing spondylitis (Thoracic region)	0.000	0.997	0.003
M45.X3 Ankylosing spondylitis (Cervicothoracic region)	0.000	0.997	0.003
M45.X2 Ankylosing spondylitis (Cervical region)	0.000	0.997	0.003
M45.X1 Ankylosing spondylitis (Occipito-atlanto-axial region)	0.000	0.997	0.003
Q56 Indeterminate sex and pseudohermaphroditism	0.003	0.997	0.000
Q34 Other congenital malformations of respiratory system	0.002	0.997	0.000
Q33 Congenital malformations of lung	0.002	0.997	0.000
Q32 Congenital malformations of trachea and bronchus	0.002	0.997	0.000
Q31 Congenital malformations of larynx	0.002	0.997	0.000
Q30 Congenital malformations of nose	0.002	0.997	0.000
Q37 Cleft palate with cleft lip	0.002	0.997	0.000
Q36 Cleft lip	0.002	0.997	0.000
Q35 Cleft palate	0.002	0.997	0.000
C14 Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx	0.003	0.997	0.000
L30.9 Dermatitis, unspecified	0.000	0.997	0.003
Q11.1 Other anophthalmos	0.003	0.997	0.000
Q43.9 Congenital malformation of intestine, unspecified	0.002	0.997	0.000
Q53.9 Undescended testicle, unspecified	0.003	0.997	0.000
Q63.2 Ectopic kidney	0.003	0.997	0.000
Q83 Congenital malformations of breast	0.002	0.997	0.000
Q43.1 Hirschsprung's disease	0.002	0.997	0.001
Z36.2 Other antenatal screening based on amniocentesis	0.000	0.997	0.003
Q39 Congenital malformations of oesophagus	0.002	0.997	0.000
M23.35 Other meniscus derangements (Posterior horn of lateral meniscus)	0.000	0.997	0.002
C14.0 Pharynx, unspecified	0.003	0.997	0.000
Q43.7 Persistent cloaca	0.002	0.997	0.001
Q43.6 Congenital fistula of rectum and anus	0.002	0.997	0.001
Q43.5 Ectopic anus	0.002	0.997	0.001
Q43.4 Duplication of intestine	0.002	0.997	0.001
Q43.2 Other congenital functional disorders of colon	0.002	0.997	0.001
Q85.8 Other phakomatoses, not elsewhere classified	0.003	0.997	0.000
Q89.9 Congenital malformation, unspecified	0.002	0.997	0.000
Q89.8 Other specified congenital malformations	0.002	0.997	0.000
Q89.7 Multiple congenital malformations, not elsewhere classified	0.002	0.997	0.000
Q89.4 Conjoined twins	0.002	0.997	0.000
Q89.1 Congenital malformations of adrenal gland	0.002	0.997	0.000
Q89.0 Congenital malformations of spleen	0.002	0.997	0.000
Q17 Other congenital malformations of ear	0.002	0.997	0.000
Q00-Q07 Congenital malformations of the nervous system	0.002	0.997	0.000
Q60.2 Renal agenesis, unspecified	0.002	0.997	0.000
Q85.1 Tuberous sclerosis	0.002	0.997	0.000
Q12 Congenital lens malformations	0.002	0.997	0.000
M45.X0 Ankylosing spondylitis (Multiple sites in spine)	0.000	0.997	0.002
Q41.9 Congenital absence, atresia and stenosis of small intestine, part unspecified	0.002	0.997	0.000
Q41.8 Congenital absence, atresia and stenosis of other specified parts of small intestine	0.002	0.997	0.000
Q41.2 Congenital absence, atresia and stenosis of ileum	0.002	0.997	0.000
Q41.1 Congenital absence, atresia and stenosis of jejunum	0.002	0.997	0.000
Q41.0 Congenital absence, atresia and stenosis of duodenum	0.002	0.997	0.000
Q42.9 Congenital absence, atresia and stenosis of large intestine, part unspecified	0.002	0.997	0.000
Q42.8 Congenital absence, atresia and stenosis of other parts of large intestine	0.002	0.997	0.000
Q42.3 Congenital absence, atresia and stenosis of anus without fistula	0.002	0.997	0.000
Q42.2 Congenital absence, atresia and stenosis of anus with fistula	0.002	0.997	0.000
Q42.1 Congenital absence, atresia and stenosis of rectum without fistula	0.002	0.997	0.000
Q42.0 Congenital absence, atresia and stenosis of rectum with fistula	0.002	0.997	0.000
Q16 Congenital malformations of ear causing impairment of hearing	0.002	0.997	0.000
Q14 Congenital malformations of posterior segment of eye	0.002	0.997	0.000
Q13 Congenital malformations of anterior segment of eye	0.002	0.997	0.000
Q98.4 Klinefelter's syndrome, unspecified	0.002	0.997	0.000
M21.17 Varus deformity, not elsewhere classified (Ankle and foot)	0.003	0.997	0.000
M23.33 Other meniscus derangements (Medial collateral ligament or Other and unspecified medial meniscus)	0.000	0.997	0.003
S05.1 Contusion of eyeball and orbital tissues	0.003	0.997	0.000
C25.3 Pancreatic duct	0.000	0.997	0.002
Q24.8 Other specified congenital malformations of heart	0.002	0.997	0.000
Q64.3 Other atresia and stenosis of urethra and bladder neck	0.002	0.997	0.000
Q52 Other congenital malformations of female genitalia	0.002	0.997	0.000
Q65-Q79 Congenital malformations and deformations of the musculoskeletal system	0.002	0.997	0.000
Q21.9 Congenital malformation of cardiac septum, unspecified	0.002	0.997	0.000
Q82 Other congenital malformations of skin	0.002	0.997	0.000
N60.1 Diffuse cystic mastopathy	0.000	0.997	0.003
Q21.8 Other congenital malformations of cardiac septa	0.002	0.997	0.000
Q21.4 Aortopulmonary septal defect	0.002	0.997	0.000
Q21.3 Tetralogy of Fallot	0.002	0.997	0.000
Q21.2 Atrioventricular septal defect	0.002	0.997	0.000
Q55 Other congenital malformations of male genital organs	0.002	0.997	0.000
Q45.9 Congenital malformation of digestive system, unspecified	0.002	0.998	0.000
Q45.2 Congenital pancreatic cyst	0.002	0.998	0.000
Q45.1 Annular pancreas	0.002	0.998	0.000
Q45.0 Agenesis, aplasia and hypoplasia of pancreas	0.002	0.998	0.000
Z36.8 Other antenatal screening	0.000	0.998	0.002
Q40.9 Congenital malformation of upper alimentary tract, unspecified	0.002	0.998	0.000
Q40.8 Other specified congenital malformations of upper alimentary tract	0.002	0.998	0.000
Q40.1 Congenital hiatus hernia	0.002	0.998	0.000
Q40.0 Congenital hypertrophic pyloric stenosis	0.002	0.998	0.000
Q98.9 Sex chromosome abnormality, male phenotype, unspecified	0.002	0.998	0.000
Q98.8 Other specified sex chromosome abnormalities, male phenotype	0.002	0.998	0.000
Q98.7 Male with sex chromosome mosaicism	0.002	0.998	0.000
Q98.6 Male with structurally abnormal sex chromosome	0.002	0.998	0.000
Q98.5 Karyotype 47,XYY	0.002	0.998	0.000
Q98.3 Other male with 46,XX karyotype	0.002	0.998	0.000
Q98.2 Klinefelter's syndrome, male with 46,XX karyotype	0.002	0.998	0.000
Q98.1 Klinefelter's syndrome, male with more than two X chromosomes	0.002	0.998	0.000
Q98.0 Klinefelter's syndrome karyotype 47,XXY	0.002	0.998	0.000
Q15 Other congenital malformations of eye	0.002	0.998	0.000
L02.9 Cutaneous abscess, furuncle and carbuncle, unspecified	0.002	0.998	0.000
Q43.8 Other specified congenital malformations of intestine	0.002	0.998	0.001
Q45.3 Other congenital malformations of pancreas and pancreatic duct	0.002	0.998	0.000
Q99.8 Other specified chromosome abnormalities	0.002	0.998	0.000
C11 Malignant neoplasm of nasopharynx	0.002	0.998	0.000
C08 Malignant neoplasm of other and unspecified major salivary glands	0.002	0.998	0.000
Q40.3 Congenital malformation of stomach, unspecified	0.002	0.998	0.000
Q83.1 Accessory breast	0.002	0.998	0.000
Z36.5 Antenatal screening for isoimmunisation	0.000	0.998	0.002
C10 Malignant neoplasm of oropharynx	0.002	0.998	0.000
C05 Malignant neoplasm of palate	0.002	0.998	0.000
Q10 Congenital malformations of eyelid, lachrymal apparatus and orbit	0.002	0.998	0.000
C03 Malignant neoplasm of gum	0.002	0.998	0.000
Q27.4 Congenital phlebectasia	0.002	0.998	0.000
Q27.2 Other congenital malformations of renal artery	0.002	0.998	0.000
Q27.1 Congenital renal artery stenosis	0.002	0.998	0.000
Q27.0 Congenital absence and hypoplasia of umbilical artery	0.002	0.998	0.000
Q45.8 Other specified congenital malformations of digestive system	0.002	0.998	0.000
Q99.9 Chromosomal abnormality, unspecified	0.002	0.998	0.000
Q99.2 Fragile X chromosome	0.002	0.998	0.000
Q99.1 46,XX true hermaphrodite	0.002	0.998	0.000
Q99.0 Chimera 46,XX/46,XY	0.002	0.998	0.000
Q11.3 Macrophthalmos	0.002	0.998	0.000
Q11.2 Microphthalmos	0.002	0.998	0.000
Q11.0 Cystic eyeball	0.002	0.998	0.000
Q27.8 Other specified congenital malformations of peripheral vascular system	0.002	0.998	0.000
C06 Malignant neoplasm of other and unspecified parts of mouth	0.002	0.998	0.000
Q40.2 Other specified congenital malformations of stomach	0.002	0.998	0.000
Q60.0 Renal agenesis, unilateral	0.002	0.998	0.000
Q87 Other specified congenital malformation syndromes affecting multiple systems	0.002	0.998	0.000
Q90.9 Down's syndrome, unspecified	0.002	0.998	0.000
Q90.2 Trisomy 21, translocation	0.002	0.998	0.000
Q90.1 Trisomy 21, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q90.0 Trisomy 21, meiotic nondisjunction	0.002	0.998	0.000
Q91.7 Patau's syndrome, unspecified	0.002	0.998	0.000
Q91.6 Trisomy 13, translocation	0.002	0.998	0.000
Q91.5 Trisomy 13, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q91.4 Trisomy 13, meiotic nondisjunction	0.002	0.998	0.000
Q91.3 Edwards' syndrome, unspecified	0.002	0.998	0.000
Q91.2 Trisomy 18, translocation	0.002	0.998	0.000
Q91.1 Trisomy 18, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q91.0 Trisomy 18, meiotic nondisjunction	0.002	0.998	0.000
Q92.9 Trisomy and partial trisomy of autosomes, unspecified	0.002	0.998	0.000
Q92.8 Other specified trisomies and partial trisomies of autosomes	0.002	0.998	0.000
Q92.7 Triploidy and polyploidy	0.002	0.998	0.000
Q92.6 Extra marker chromosomes	0.002	0.998	0.000
Q92.5 Duplications with other complex rearrangements	0.002	0.998	0.000
Q92.4 Duplications seen only at prometaphase	0.002	0.998	0.000
Q92.3 Minor partial trisomy	0.002	0.998	0.000
Q92.2 Major partial trisomy	0.002	0.998	0.000
Q92.1 Whole chromosome trisomy, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q92.0 Whole chromosome trisomy, meiotic nondisjunction	0.002	0.998	0.000
Q93.9 Deletion from autosomes, unspecified	0.002	0.998	0.000
Q93.8 Other deletions from the autosomes	0.002	0.998	0.000
Q93.7 Deletions with other complex rearrangements	0.002	0.998	0.000
Q93.6 Deletions seen only at prometaphase	0.002	0.998	0.000
Q93.5 Other deletions of part of a chromosome	0.002	0.998	0.000
Q93.4 Deletion of short arm of chromosome 5	0.002	0.998	0.000
Q93.3 Deletion of short arm of chromosome 4	0.002	0.998	0.000
Q93.2 Chromosome replaced with ring or dicentric	0.002	0.998	0.000
Q93.1 Whole chromosome monosomy, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q93.0 Whole chromosome monosomy, meiotic nondisjunction	0.002	0.998	0.000
Q95.9 Balanced rearrangement and structural marker, unspecified	0.002	0.998	0.000
Q95.8 Other balanced rearrangements and structural markers	0.002	0.998	0.000
Q95.5 Individuals with autosomal fragile site	0.002	0.998	0.000
Q95.4 Individuals with marker heterochromatin	0.002	0.998	0.000
Q95.3 Balanced sex/autosomal rearrangement in abnormal individual	0.002	0.998	0.000
Q95.2 Balanced autosomal rearrangement in abnormal individual	0.002	0.998	0.000
Q95.1 Chromosome inversion in normal individual	0.002	0.998	0.000
Q95.0 Balanced translocation and insertion in normal individual	0.002	0.998	0.000
Q97.9 Sex chromosome abnormality, female phenotype, unspecified	0.002	0.998	0.000
Q97.8 Other specified sex chromosome abnormalities, female phenotype	0.002	0.998	0.000
Q97.3 Female with 46,XY karyotype	0.002	0.998	0.000
Q97.2 Mosaicism, lines with various numbers of X chromosomes	0.002	0.998	0.000
Q97.1 Female with more than three X chromosomes	0.002	0.998	0.000
Q97.0 Karyotype 47,XXX	0.002	0.998	0.000
C13 Malignant neoplasm of hypopharynx	0.002	0.998	0.000
Q80.9 Congenital ichthyosis, unspecified	0.002	0.998	0.000
Q80.8 Other congenital ichthyosis	0.002	0.998	0.000
Q80.4 Harlequin foetus	0.002	0.998	0.000
Q80.3 Congenital bullous ichthyosiform erythroderma	0.002	0.998	0.000
Q80.2 Lamellar ichthyosis	0.002	0.998	0.000
Q80.1 X-linked ichthyosis	0.002	0.998	0.000
Q80.0 Ichthyosis vulgaris	0.002	0.998	0.000
Q81.9 Epidermolysis bullosa, unspecified	0.002	0.998	0.000
Q81.8 Other epidermolysis bullosa	0.002	0.998	0.000
Q81.2 Epidermolysis bullosa dystrophica	0.002	0.998	0.000
Q81.1 Epidermolysis bullosa letalis	0.002	0.998	0.000
Q81.0 Epidermolysis bullosa simplex	0.002	0.998	0.000
Q84.9 Congenital malformation of integument, unspecified	0.002	0.998	0.000
Q84.8 Other specified congenital malformations of integument	0.002	0.998	0.000
Q84.6 Other congenital malformations of nails	0.002	0.998	0.000
Q84.5 Enlarged and hypertrophic nails	0.002	0.998	0.000
Q84.4 Congenital leukonychia	0.002	0.998	0.000
Q84.3 Anonychia	0.002	0.998	0.000
Q84.2 Other congenital malformations of hair	0.002	0.998	0.000
Q84.1 Congenital morphological disturbances of hair, not elsewhere classified	0.002	0.998	0.000
Q84.0 Congenital alopecia	0.002	0.998	0.000
Q85.9 Phakomatosis, unspecified	0.002	0.998	0.000
Q86.8 Other congenital malformation syndromes due to known exogenous causes	0.002	0.998	0.000
Q86.2 Dysmorphism due to warfarin	0.002	0.998	0.000
Q86.1 Foetal hydantoin syndrome	0.002	0.998	0.000
Q86.0 Foetal alcohol syndrome (dysmorphic)	0.002	0.998	0.000
Q96.8 Other variants of Turner's syndrome	0.002	0.998	0.000
Q96.4 Mosaicism, 45,X/other cell line(s) with abnormal sex chromosome	0.002	0.998	0.000
Q96.3 Mosaicism, 45,X/46,XX or XY	0.002	0.998	0.000
Q96.2 Karyotype 46,X with abnormal sex chromosome, except iso (Xq)	0.002	0.998	0.000
Q96.1 Karyotype 46,X iso (Xq)	0.002	0.998	0.000
Q96.0 Karyotype 45,X	0.002	0.998	0.000
E53 Deficiency of other B group vitamins	0.000	0.998	0.002
Q53.2 Undescended testicle, bilateral	0.002	0.998	0.000
Q53.0 Ectopic testis	0.002	0.998	0.000
C12 Malignant neoplasm of pyriform sinus	0.002	0.998	0.000
Q96.9 Turner's syndrome, unspecified	0.002	0.998	0.000
C04 Malignant neoplasm of floor of mouth	0.002	0.998	0.000
Q51 Congenital malformations of uterus and cervix	0.002	0.998	0.000
Q66 Congenital deformities of feet	0.002	0.998	0.000
Q17.5 Prominent ear	0.002	0.998	0.000
Q56.4 Indeterminate sex, unspecified	0.002	0.998	0.000
Q56.3 Pseudohermaphroditism, unspecified	0.002	0.998	0.000
Q56.2 Female pseudohermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q56.1 Male pseudohermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q56.0 Hermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q66.2 Metatarsus varus	0.002	0.998	0.000
C14.8 Overlapping lesion of lip, oral cavity and pharynx	0.002	0.998	0.000
C14.2 Waldeyer's ring	0.002	0.998	0.000
Q30.9 Congenital malformation of nose, unspecified	0.002	0.998	0.000
Q30.8 Other congenital malformations of nose	0.002	0.998	0.000
Q30.3 Congenital perforated nasal septum	0.002	0.998	0.000
Q30.2 Fissured, notched and cleft nose	0.002	0.998	0.000
Q30.1 Agenesis and underdevelopment of nose	0.002	0.998	0.000
Q30.0 Choanal atresia	0.002	0.998	0.000
Q31.9 Congenital malformation of larynx, unspecified	0.002	0.998	0.000
Q31.8 Other congenital malformations of larynx	0.002	0.998	0.000
Q31.5 Congenital laryngomalacia	0.002	0.998	0.000
Q31.4 Congenital laryngeal stridor	0.002	0.998	0.000
Q31.3 Laryngocele	0.002	0.998	0.000
Q31.2 Laryngeal hypoplasia	0.002	0.998	0.000
Q31.1 Congenital subglottic stenosis	0.002	0.998	0.000
Q31.0 Web of larynx	0.002	0.998	0.000
Q32.4 Other congenital malformations of bronchus	0.002	0.998	0.000
Q32.3 Congenital stenosis of bronchus	0.002	0.998	0.000
Q32.2 Congenital bronchomalacia	0.002	0.998	0.000
Q32.1 Other congenital malformations of trachea	0.002	0.998	0.000
Q32.0 Congenital tracheomalacia	0.002	0.998	0.000
Q33.9 Congenital malformation of lung, unspecified	0.002	0.998	0.000
Q33.8 Other congenital malformations of lung	0.002	0.998	0.000
Q33.6 Hypoplasia and dysplasia of lung	0.002	0.998	0.000
Q33.5 Ectopic tissue in lung	0.002	0.998	0.000
Q33.4 Congenital bronchiectasis	0.002	0.998	0.000
Q33.3 Agenesis of lung	0.002	0.998	0.000
Q33.2 Sequestration of lung	0.002	0.998	0.000
Q33.1 Accessory lobe of lung	0.002	0.998	0.000
Q33.0 Congenital cystic lung	0.002	0.998	0.000
Q34.9 Congenital malformation of respiratory system, unspecified	0.002	0.998	0.000
Q34.8 Other specified congenital malformations of respiratory system	0.002	0.998	0.000
Q34.1 Congenital cyst of mediastinum	0.002	0.998	0.000
Q34.0 Anomaly of pleura	0.002	0.998	0.000
Q35.9 Cleft palate, unspecified	0.002	0.998	0.000
Q35.8 (Cleft palate, unspecified, bilateral)	0.002	0.998	0.000

This table lists the top 500 terms ordered by p(effect).

The full results table can be downloaded from this page.

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Variant-specific associations