TreeWAS – [N94.8] Other specified conditions associated with female genital organs and menstrual cycle

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs17425572 lBF = `0.62179` Chr`9` : `88,006,338`	0.000	0.292	0.708
rs72756269 lBF = `20.6952` Chr`9` : `119,147,710`	0.594	0.406	0.000
rs12000567 lBF = `4.07403` Chr`9` : `789,499`	0.593	0.407	0.000
rs75622023 lBF = `16.1719` Chr`9` : `28,607,634`	0.574	0.426	0.000
rs56190763 lBF = `13.9754` Chr`9` : `91,343,917`	0.555	0.445	0.000
rs116929209 lBF = `23.964` Chr`9` : `13,692,166`	0.540	0.460	0.000
rs10114038 lBF = `1.31177` Chr`9` : `127,327,763`	0.516	0.484	0.000
rs144087410 lBF = `1.81966` Chr`9` : `5,185,581`	0.512	0.487	0.000
rs62531470 lBF = `1.6886` Chr`9` : `540,319`	0.471	0.529	0.000
rs73644982 lBF = `13.9807` Chr`9` : `32,523,117`	0.465	0.535	0.000
rs117196480 lBF = `16.5445` Chr`9` : `101,301,307`	0.457	0.542	0.000
rs118142265 lBF = `1.58801` Chr`9` : `132,194,033`	0.000	0.579	0.420
rs62574559 lBF = `13.3756` Chr`9` : `96,366,133`	0.418	0.582	0.000
rs75585141 lBF = `14.4069` Chr`9` : `13,387,483`	0.402	0.598	0.000
rs16928280 lBF = `6.01786` Chr`9` : `8,695,233`	0.362	0.638	0.000
rs117926975 lBF = `4.43495` Chr`9` : `97,358,141`	0.361	0.638	0.000
rs142944815 lBF = `2.59871` Chr`9` : `8,773,566`	0.347	0.653	0.000
rs150484890 lBF = `2.77875` Chr`9` : `6,643,981`	0.339	0.661	0.000
rs2150702 lBF = `0.399886` Chr`9` : `5,893,861`	0.338	0.662	0.000
rs1075654 lBF = `23.1554` Chr`9` : `136,928,276`	0.338	0.662	0.000
rs10283576 lBF = `19.8492` Chr`9` : `88,106,667`	0.334	0.665	0.000
rs147338646 lBF = `5.39391` Chr`9` : `11,812,813`	0.334	0.665	0.000
rs77322120 lBF = `13.2546` Chr`9` : `101,171,443`	0.328	0.672	0.000
rs138633335 lBF = `19.1105` Chr`9` : `137,459,325`	0.307	0.693	0.000
rs12336160 lBF = `0.996007` Chr`9` : `33,283,582`	0.306	0.693	0.000
rs78199931 lBF = `17.2832` Chr`9` : `140,865,334`	0.298	0.702	0.000
rs11789912 lBF = `15.8406` Chr`9` : `130,605,739`	0.294	0.706	0.000
rs35303200 lBF = `18.3789` Chr`9` : `82,740,305`	0.257	0.743	0.000
rs117260909 lBF = `0.304807` Chr`9` : `3,195,775`	0.253	0.747	0.000
rs60250264 lBF = `1.93414` Chr`9` : `8,897,187`	0.235	0.765	0.000
rs72746681 lBF = `16.7306` Chr`9` : `88,643,632`	0.213	0.786	0.001
rs117869101 lBF = `21.0144` Chr`9` : `84,429,893`	0.205	0.795	0.000
rs10983320 lBF = `5.13841` Chr`9` : `119,483,689`	0.000	0.814	0.186
rs184522131 lBF = `1.69043` Chr`9` : `90,177,521`	0.182	0.817	0.000
rs117754409 lBF = `15.5268` Chr`9` : `13,934,924`	0.182	0.817	0.000
rs7871607 lBF = `24.204` Chr`9` : `85,546,352`	0.176	0.824	0.000
rs116961907 lBF = `20.2002` Chr`9` : `28,511,184`	0.153	0.847	0.000
rs75445152 lBF = `16.2649` Chr`9` : `104,310,061`	0.148	0.851	0.000
rs185095244 lBF = `0.251196` Chr`9` : `8,766,114`	0.135	0.865	0.000
rs80001694 lBF = `12.7976` Chr`9` : `120,105,508`	0.132	0.868	0.000
rs62571477 lBF = `27.2395` Chr`9` : `137,865,056`	0.131	0.868	0.000
rs4979462 lBF = `0.196688` Chr`9` : `117,567,013`	0.131	0.869	0.000
rs77911647 lBF = `25.709` Chr`9` : `37,580,543`	0.095	0.905	0.000
rs74729480 lBF = `14.6486` Chr`9` : `137,375,254`	0.092	0.908	0.000
rs80321149 lBF = `13.0616` Chr`9` : `16,150,000`	0.080	0.920	0.000
rs78925264 lBF = `0.599859` Chr`9` : `9,015,087`	0.072	0.928	0.000
rs76605533 lBF = `18.0219` Chr`9` : `100,624,553`	0.055	0.945	0.000
rs117233030 lBF = `16.6065` Chr`9` : `14,348,774`	0.055	0.945	0.000
rs1333005 lBF = `17.474` Chr`9` : `130,042,369`	0.054	0.946	0.000
rs12236890 lBF = `-0.0413664` Chr`9` : `3,157,137`	0.053	0.947	0.000
rs7045620 lBF = `14.6764` Chr`9` : `137,836,809`	0.052	0.947	0.000
rs56281909 lBF = `11.3432` Chr`9` : `4,418,821`	0.051	0.949	0.000
rs7045640 lBF = `0.303315` Chr`9` : `2,978,377`	0.043	0.956	0.000
rs913351 lBF = `10.5594` Chr`9` : `130,033,547`	0.043	0.957	0.000
rs7852296 lBF = `1.12641` Chr`9` : `126,352,218`	0.041	0.959	0.000
rs77418183 lBF = `12.5886` Chr`9` : `21,929,486`	0.035	0.964	0.001
rs117499721 lBF = `28.8784` Chr`9` : `116,579,948`	0.034	0.966	0.000
rs186821245 lBF = `0.265221` Chr`9` : `136,606,035`	0.033	0.967	0.000
rs74732462 lBF = `7.95748` Chr`9` : `133,436,054`	0.033	0.967	0.000
rs117217495 lBF = `16.3591` Chr`9` : `24,538,142`	0.032	0.967	0.000
rs77427150 lBF = `13.5234` Chr`9` : `101,239,130`	0.031	0.969	0.000
rs73387635 lBF = `15.4845` Chr`9` : `1,814,698`	0.029	0.971	0.000
rs78284770 lBF = `17.3311` Chr`9` : `91,652,587`	0.025	0.974	0.000
rs12378793 lBF = `6.11146` Chr`9` : `79,613,935`	0.026	0.974	0.000
rs72745135 lBF = `15.0573` Chr`9` : `78,973,431`	0.024	0.975	0.000
rs1329568 lBF = `0.024609` Chr`9` : `37,037,976`	0.000	0.976	0.023
rs41314453 lBF = `10.1695` Chr`9` : `136,307,825`	0.022	0.978	0.000
rs78608331 lBF = `12.388` Chr`9` : `13,257,251`	0.021	0.979	0.000
rs3731257 lBF = `90.8856` Chr`9` : `21,966,221`	0.000	0.979	0.021
rs11506819 lBF = `12.1203` Chr`9` : `108,129,480`	0.019	0.981	0.000
rs1679013 lBF = `8.6352` Chr`9` : `22,206,987`	0.018	0.982	0.000
rs116995584 lBF = `15.4671` Chr`9` : `76,040,600`	0.001	0.983	0.016
rs10813374 lBF = `0.0431441` Chr`9` : `30,879,675`	0.015	0.984	0.000
rs117415762 lBF = `13.5576` Chr`9` : `77,698,356`	0.015	0.985	0.000
rs12000457 lBF = `0.0170966` Chr`9` : `86,944,425`	0.014	0.986	0.000
rs10993738 lBF = `0.58737` Chr`9` : `93,633,240`	0.014	0.986	0.000
rs118156051 lBF = `16.9077` Chr`9` : `103,381,388`	0.014	0.986	0.000
rs111571219 lBF = `14.5965` Chr`9` : `102,420,794`	0.013	0.986	0.000
rs1175605 lBF = `18.1644` Chr`9` : `95,233,248`	0.012	0.988	0.000
rs111958418 lBF = `20.8287` Chr`9` : `22,219,565`	0.012	0.988	0.000
rs1038195 lBF = `18.4342` Chr`9` : `137,855,660`	0.011	0.989	0.000
rs117932393 lBF = `0.0156868` Chr`9` : `109,152,709`	0.010	0.989	0.000
rs74304768 lBF = `17.1946` Chr`9` : `79,606,878`	0.010	0.990	0.000
rs7865516 lBF = `23.7461` Chr`9` : `16,113,134`	0.010	0.990	0.000
rs114646018 lBF = `0.00725446` Chr`9` : `18,890,061`	0.009	0.990	0.000
rs34634894 lBF = `20.2004` Chr`9` : `82,652,022`	0.009	0.991	0.000
rs17408309 lBF = `14.2638` Chr`9` : `71,632,265`	0.009	0.991	0.000
rs113607577 lBF = `0.0172672` Chr`9` : `77,455,459`	0.008	0.991	0.000
rs114356520 lBF = `0.0111969` Chr`9` : `112,128,998`	0.008	0.992	0.000
rs7024300 lBF = `0.04881` Chr`9` : `107,589,567`	0.007	0.992	0.000
rs56065549 lBF = `11.9825` Chr`9` : `95,906,364`	0.007	0.993	0.000
rs55760117 lBF = `18.9306` Chr`9` : `129,740,272`	0.007	0.993	0.000
rs111873027 lBF = `0.00829232` Chr`9` : `126,953,640`	0.006	0.993	0.000
rs11144781 lBF = `0.229588` Chr`9` : `78,793,421`	0.007	0.993	0.000
rs10815355 lBF = `0.00477494` Chr`9` : `622,523`	0.006	0.994	0.000
rs77437704 lBF = `13.6847` Chr`9` : `79,623,352`	0.006	0.994	0.000
rs979203 lBF = `10.0324` Chr`9` : `13,730,665`	0.000	0.994	0.006
rs72758841 lBF = `0.00678835` Chr`9` : `131,475,583`	0.006	0.994	0.000
rs10491777 lBF = `15.847` Chr`9` : `14,352,001`	0.006	0.994	0.000
rs7032940 lBF = `-0.0818828` Chr`9` : `112,945,405`	0.000	0.994	0.006
rs75059066 lBF = `5.824` Chr`9` : `14,373,551`	0.005	0.995	0.000
rs7869487 lBF = `0.54459` Chr`9` : `117,580,914`	0.005	0.995	0.000
rs10968749 lBF = `6.84227` Chr`9` : `28,752,484`	0.005	0.995	0.000
rs118036720 lBF = `22.9077` Chr`9` : `5,408,587`	0.005	0.995	0.000
rs76718115 lBF = `14.4603` Chr`9` : `112,413,997`	0.005	0.995	0.000
rs117593677 lBF = `14.7112` Chr`9` : `21,318,205`	0.005	0.995	0.000
rs10961577 lBF = `0.0718727` Chr`9` : `14,562,314`	0.000	0.995	0.005
rs79460104 lBF = `15.2248` Chr`9` : `79,610,628`	0.005	0.995	0.000
rs16925263 lBF = `17.4118` Chr`9` : `7,060,997`	0.005	0.995	0.000
rs117540688 lBF = `12.0488` Chr`9` : `6,064,428`	0.005	0.995	0.000
rs6478108 lBF = `2.18757` Chr`9` : `117,558,703`	0.005	0.995	0.000
rs76909134 lBF = `18.6929` Chr`9` : `138,798,380`	0.004	0.996	0.000
rs78119065 lBF = `14.991` Chr`9` : `1,833,972`	0.004	0.996	0.000
rs117362775 lBF = `13.8721` Chr`9` : `112,587,101`	0.004	0.996	0.000
rs7853287 lBF = `-0.0569396` Chr`9` : `117,549,327`	0.004	0.996	0.000
rs10758732 lBF = `11.2727` Chr`9` : `5,991,772`	0.004	0.996	0.000
rs815847 lBF = `-0.00937283` Chr`9` : `84,222,618`	0.004	0.996	0.000
rs10965243 lBF = `6.81858` Chr`9` : `22,130,065`	0.000	0.997	0.003
rs17857515 lBF = `18.2473` Chr`9` : `32,542,278`	0.003	0.997	0.000
rs7024058 lBF = `17.5874` Chr`9` : `1,938,082`	0.003	0.997	0.000
rs512770 lBF = `8.25329` Chr`9` : `136,133,506`	0.003	0.997	0.000
rs4741351 lBF = `0.0679959` Chr`9` : `14,222,782`	0.000	0.997	0.003
rs41280725 lBF = `19.7128` Chr`9` : `5,469,654`	0.001	0.997	0.002
rs142965926 lBF = `0.0469266` Chr`9` : `136,618,128`	0.003	0.997	0.000
rs117120696 lBF = `20.1492` Chr`9` : `81,426,723`	0.003	0.997	0.000
rs2213920 lBF = `0.019707` Chr`9` : `118,271,584`	0.003	0.997	0.000
rs116919233 lBF = `14.0946` Chr`9` : `119,991,655`	0.003	0.997	0.000
rs139863644 lBF = `0.00339663` Chr`9` : `5,972,759`	0.003	0.997	0.000
rs7035284 lBF = `-0.0671117` Chr`9` : `21,678,973`	0.003	0.997	0.000
rs16924016 lBF = `0.0976692` Chr`9` : `100,511,331`	0.003	0.997	0.000
rs751543 lBF = `0.160043` Chr`9` : `119,122,342`	0.003	0.997	0.000
rs12003072 lBF = `0.013909` Chr`9` : `86,771,161`	0.000	0.997	0.002
rs586716 lBF = `-0.0583965` Chr`9` : `22,488,678`	0.003	0.997	0.000
rs140993796 lBF = `-0.00512351` Chr`9` : `111,536,356`	0.002	0.997	0.000
rs436582 lBF = `-0.024077` Chr`9` : `118,956,668`	0.002	0.998	0.000
rs79481790 lBF = `5.06567` Chr`9` : `73,702,520`	0.000	0.998	0.002
rs58680346 lBF = `5.13866` Chr`9` : `7,604,965`	0.002	0.998	0.000
rs377310910 lBF = `0.0488873` Chr`9` : `1,940,937`	0.002	0.998	0.000
rs3904778 lBF = `-0.0629115` Chr`9` : `16,681,993`	0.002	0.998	0.000
rs117000167 lBF = `0.00350061` Chr`9` : `124,678,821`	0.002	0.998	0.000
rs7864133 lBF = `0.00190717` Chr`9` : `84,053,686`	0.002	0.998	0.000
rs10738626 lBF = `0.936624` Chr`9` : `22,373,457`	0.002	0.998	0.000
rs117571560 lBF = `14.6503` Chr`9` : `76,169,871`	0.001	0.998	0.001
rs3217992 lBF = `200.854` Chr`9` : `22,003,223`	0.000	0.998	0.002
rs75125430 lBF = `16.6037` Chr`9` : `24,472,623`	0.001	0.998	0.001
rs7043114 lBF = `-0.0800226` Chr`9` : `95,387,983`	0.000	0.998	0.002
rs76780579 lBF = `0.00258463` Chr`9` : `16,414,506`	0.002	0.998	0.000
rs3810936 lBF = `0.923276` Chr`9` : `117,552,885`	0.002	0.998	0.000
rs72652478 lBF = `14.3802` Chr`9` : `22,102,043`	0.000	0.998	0.002
rs17461620 lBF = `0.49764` Chr`9` : `88,963,008`	0.000	0.998	0.002
rs62544064 lBF = `0.00328964` Chr`9` : `26,469,905`	0.002	0.998	0.000
rs11790994 lBF = `0.00850557` Chr`9` : `98,429,266`	0.000	0.998	0.002
rs4463516 lBF = `-0.0771065` Chr`9` : `32,867,481`	0.000	0.998	0.002
rs111600634 lBF = `1.82236` Chr`9` : `120,618,625`	0.002	0.998	0.000
rs74308953 lBF = `0.00117694` Chr`9` : `121,431,189`	0.001	0.998	0.000
rs16938145 lBF = `-0.0162183` Chr`9` : `2,256,092`	0.000	0.998	0.002
rs1467311 lBF = `0.133468` Chr`9` : `110,536,932`	0.000	0.998	0.002
rs7045881 lBF = `-0.026197` Chr`9` : `26,935,996`	0.002	0.998	0.000
rs1011970 lBF = `9.65924` Chr`9` : `22,062,134`	0.002	0.998	0.000
rs1359742 lBF = `1.45994` Chr`9` : `22,336,996`	0.002	0.998	0.000
rs11144688 lBF = `0.00352942` Chr`9` : `78,542,286`	0.002	0.998	0.000
rs3780181 lBF = `3.15919` Chr`9` : `2,640,759`	0.001	0.998	0.000
rs6478109 lBF = `1.00194` Chr`9` : `117,568,766`	0.002	0.998	0.000
rs7021404 lBF = `0.00087256` Chr`9` : `25,414,051`	0.001	0.998	0.000
rs2006996 lBF = `0.374558` Chr`9` : `117,592,638`	0.000	0.999	0.001
rs7847231 lBF = `0.141595` Chr`9` : `118,209,071`	0.000	0.999	0.001
rs1475545 lBF = `-0.0732173` Chr`9` : `100,316,230`	0.001	0.999	0.000
rs74759033 lBF = `10.8675` Chr`9` : `127,676,918`	0.001	0.999	0.000
rs12000445 lBF = `0.912959` Chr`9` : `23,426,271`	0.000	0.999	0.001
rs7848647 lBF = `0.737474` Chr`9` : `117,569,046`	0.001	0.999	0.000
rs9406636 lBF = `-0.119003` Chr`9` : `16,385,132`	0.001	0.999	0.000
rs7867456 lBF = `0.199375` Chr`9` : `21,035,307`	0.000	0.999	0.001
rs4366152 lBF = `1.24374` Chr`9` : `117,564,875`	0.001	0.999	0.000
rs4263839 lBF = `1.24218` Chr`9` : `117,566,440`	0.001	0.999	0.000
rs2805062 lBF = `0.0124346` Chr`9` : `24,560,577`	0.001	0.999	0.000
rs17244432 lBF = `15.3075` Chr`9` : `139,801,662`	0.001	0.999	0.001
rs4977754 lBF = `7.24733` Chr`9` : `22,062,012`	0.001	0.999	0.000
rs182700414 lBF = `0.00117781` Chr`9` : `121,971,770`	0.001	0.999	0.000
rs12346945 lBF = `0.0003603` Chr`9` : `98,844,059`	0.001	0.999	0.000
rs145699582 lBF = `0.00035679` Chr`9` : `5,169,600`	0.001	0.999	0.000
rs117488235 lBF = `19.2182` Chr`9` : `15,707,430`	0.000	0.999	0.001
rs76495380 lBF = `0.0004597` Chr`9` : `20,844,431`	0.001	0.999	0.000
rs11141597 lBF = `0.16767` Chr`9` : `89,527,458`	0.001	0.999	0.000
rs75004325 lBF = `14.3185` Chr`9` : `73,586,372`	0.000	0.999	0.001
rs4246905 lBF = `0.724323` Chr`9` : `117,553,249`	0.001	0.999	0.000
rs7849530 lBF = `-0.0530194` Chr`9` : `94,927,735`	0.001	0.999	0.000
rs9969804 lBF = `-0.081137` Chr`9` : `95,429,120`	0.000	0.999	0.001
rs75087119 lBF = `17.2273` Chr`9` : `7,426,671`	0.001	0.999	0.000
rs187979858 lBF = `0.0135995` Chr`9` : `136,600,098`	0.001	0.999	0.000
rs77005723 lBF = `23.0241` Chr`9` : `131,211,201`	0.001	0.999	0.000
rs7869550 lBF = `-0.0592271` Chr`9` : `119,134,796`	0.000	0.999	0.001
rs41277101 lBF = `5.09532` Chr`9` : `36,337,253`	0.001	0.999	0.000
rs114771314 lBF = `0.0004006` Chr`9` : `12,805,030`	0.001	0.999	0.000
rs10973964 lBF = `14.244` Chr`9` : `38,669,362`	0.001	0.999	0.000
rs114241027 lBF = `0.00030213` Chr`9` : `12,802,823`	0.001	0.999	0.000
rs76695314 lBF = `0.00021739` Chr`9` : `30,912,925`	0.001	0.999	0.000
rs17785420 lBF = `0.00018714` Chr`9` : `30,920,638`	0.001	0.999	0.000
rs55721418 lBF = `20.0497` Chr`9` : `133,913,740`	0.001	0.999	0.000
rs16906350 lBF = `1.89955` Chr`9` : `120,618,956`	0.001	0.999	0.000
rs148861184 lBF = `0.00012183` Chr`9` : `30,975,637`	0.001	0.999	0.000
rs12342947 lBF = `20.0509` Chr`9` : `7,026,860`	0.001	0.999	0.000
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rs190548934 lBF = `0.0317221` Chr`9` : `122,233,590`	0.000	1.000	0.000
rs12346772 lBF = `0.010182` Chr`9` : `113,920,599`	0.000	1.000	0.000
rs1360695 lBF = `-0.078645` Chr`9` : `122,549,086`	0.000	1.000	0.000
rs74862371 lBF = `16.8875` Chr`9` : `7,028,832`	0.000	1.000	0.000
rs117933286 lBF = `14.503` Chr`9` : `81,306,530`	0.000	1.000	0.000
rs80234524 lBF = `8.67109` Chr`9` : `102,716,279`	0.000	1.000	0.000
rs16919333 lBF = `7.20476` Chr`9` : `103,452,327`	0.000	1.000	0.000
rs139475366 lBF = `0.00703853` Chr`9` : `100,273,497`	0.000	1.000	0.000
rs13289122 lBF = `0.00501976` Chr`9` : `107,757,003`	0.000	1.000	0.000
rs320209 lBF = `-0.0483587` Chr`9` : `104,944,755`	0.000	1.000	0.000
rs12339094 lBF = `-0.0771213` Chr`9` : `90,410,222`	0.000	1.000	0.000
rs1333042 lBF = `395.398` Chr`9` : `22,103,813`	0.000	1.000	0.000
rs1968498 lBF = `9.0386` Chr`9` : `86,696,174`	0.000	1.000	0.000
rs803927 lBF = `7.65919` Chr`9` : `119,403,611`	0.000	1.000	0.000
rs28377268 lBF = `0.300067` Chr`9` : `98,225,056`	0.000	1.000	0.000
rs7849581 lBF = `0.151245` Chr`9` : `9,924,724`	0.000	1.000	0.000
rs118106262 lBF = `0.0423095` Chr`9` : `8,658,954`	0.000	1.000	0.000
rs10820447 lBF = `-0.0138771` Chr`9` : `99,132,044`	0.000	1.000	0.000
rs17266958 lBF = `-0.0318511` Chr`9` : `83,265,249`	0.000	1.000	0.000
rs7027071 lBF = `-0.0325208` Chr`9` : `126,305,042`	0.000	1.000	0.000
rs12344488 lBF = `-0.0338799` Chr`9` : `78,425,925`	0.000	1.000	0.000
rs10981012 lBF = `-0.0542201` Chr`9` : `114,453,006`	0.000	1.000	0.000
rs10512049 lBF = `-0.0571178` Chr`9` : `78,276,675`	0.000	1.000	0.000
rs76733568 lBF = `27.8026` Chr`9` : `24,659,540`	0.000	1.000	0.000
rs17433526 lBF = `9.94738` Chr`9` : `131,912,341`	0.000	1.000	0.000
rs73628692 lBF = `4.97563` Chr`9` : `132,349,597`	0.000	1.000	0.000
rs10969557 lBF = `2.49886` Chr`9` : `310,970`	0.000	1.000	0.000
rs150066336 lBF = `2.1353` Chr`9` : `13,475,446`	0.000	1.000	0.000
rs17637172 lBF = `0.0235876` Chr`9` : `122,223,958`	0.000	1.000	0.000
rs138901640 lBF = `-0.00500691` Chr`9` : `120,793,765`	0.000	1.000	0.000
rs1780159 lBF = `-0.0111503` Chr`9` : `15,157,977`	0.000	1.000	0.000
rs11243676 lBF = `-0.0131403` Chr`9` : `135,096,767`	0.000	1.000	0.000
rs1407508 lBF = `-0.0168105` Chr`9` : `101,644,538`	0.000	1.000	0.000
rs1360382 lBF = `-0.0298418` Chr`9` : `23,379,719`	0.000	1.000	0.000
rs7853844 lBF = `-0.0657441` Chr`9` : `118,050,414`	0.000	1.000	0.000
rs3750552 lBF = `-0.0872866` Chr`9` : `71,943,002`	0.000	1.000	0.000
rs7848024 lBF = `-0.0887192` Chr`9` : `105,573,037`	0.000	1.000	0.000
rs10810657 lBF = `20.0354` Chr`9` : `16,884,586`	0.000	1.000	0.000
rs7021724 lBF = `11.9942` Chr`9` : `2,527,900`	0.000	1.000	0.000
rs16925298 lBF = `10.4186` Chr`9` : `7,081,674`	0.000	1.000	0.000
rs340921 lBF = `8.26787` Chr`9` : `6,090,160`	0.000	1.000	0.000
rs7028759 lBF = `7.73393` Chr`9` : `100,677,883`	0.000	1.000	0.000
rs13300218 lBF = `1.03505` Chr`9` : `139,399,641`	0.000	1.000	0.000
rs1535459 lBF = `0.239679` Chr`9` : `10,550,204`	0.000	1.000	0.000
rs4879926 lBF = `0.0141498` Chr`9` : `35,700,837`	0.000	1.000	0.000
rs1325154 lBF = `0.00855956` Chr`9` : `12,582,565`	0.000	1.000	0.000
rs35419961 lBF = `-0.031347` Chr`9` : `11,930,364`	0.000	1.000	0.000
rs364477 lBF = `-0.0522908` Chr`9` : `955,794`	0.000	1.000	0.000
rs13292136 lBF = `0.235448` Chr`9` : `81,952,128`	0.000	1.000	0.000
rs1360517 lBF = `0.0789714` Chr`9` : `13,007,129`	0.000	1.000	0.000
rs10814247 lBF = `0.0487544` Chr`9` : `35,507,290`	0.000	1.000	0.000
rs2273720 lBF = `-0.00037112` Chr`9` : `27,209,469`	0.000	1.000	0.000
rs1755271 lBF = `-0.00712407` Chr`9` : `17,979,578`	0.000	1.000	0.000
rs6479352 lBF = `-0.0400116` Chr`9` : `94,281,710`	0.000	1.000	0.000
rs10982990 lBF = `-0.0404249` Chr`9` : `118,658,716`	0.000	1.000	0.000
rs10738607 lBF = `371.077` Chr`9` : `22,088,094`	0.000	1.000	0.000
rs944797 lBF = `364.833` Chr`9` : `22,115,286`	0.000	1.000	0.000
rs10733376 lBF = `361.867` Chr`9` : `22,114,469`	0.000	1.000	0.000
rs72748988 lBF = `19.0653` Chr`9` : `92,041,530`	0.000	1.000	0.000
rs1417290 lBF = `17.5513` Chr`9` : `7,046,917`	0.000	1.000	0.000
rs78296588 lBF = `15.8425` Chr`9` : `102,305,131`	0.000	1.000	0.000
rs8176741 lBF = `13.4069` Chr`9` : `136,131,461`	0.000	1.000	0.000
rs3731249 lBF = `12.0614` Chr`9` : `21,970,916`	0.000	1.000	0.000
rs72687969 lBF = `5.70085` Chr`9` : `4,104,403`	0.000	1.000	0.000
rs1570582 lBF = `3.29743` Chr`9` : `85,910,512`	0.000	1.000	0.000
rs35775808 lBF = `0.734475` Chr`9` : `102,225,544`	0.000	1.000	0.000
rs2210327 lBF = `0.00985079` Chr`9` : `18,109,235`	0.000	1.000	0.000
rs10969106 lBF = `0.00960723` Chr`9` : `29,364,327`	0.000	1.000	0.000
rs10818854 lBF = `0.00070567` Chr`9` : `126,446,778`	0.000	1.000	0.000
rs17641078 lBF = `-0.0207988` Chr`9` : `1,056,959`	0.000	1.000	0.000
rs2820914 lBF = `-0.0559393` Chr`9` : `7,195,408`	0.000	1.000	0.000
rs1806864 lBF = `-0.0599879` Chr`9` : `90,031,669`	0.000	1.000	0.000
rs4977844 lBF = `-0.0972981` Chr`9` : `23,295,899`	0.000	1.000	0.000
rs1537370 lBF = `339.752` Chr`9` : `22,084,310`	0.000	1.000	0.000
rs10757269 lBF = `323.969` Chr`9` : `22,072,264`	0.000	1.000	0.000
rs10975479 lBF = `35.199` Chr`9` : `6,197,377`	0.000	1.000	0.000
rs74903566 lBF = `11.9479` Chr`9` : `21,941,315`	0.000	1.000	0.000
rs2297603 lBF = `6.02943` Chr`9` : `101,778,265`	0.000	1.000	0.000
rs2506125 lBF = `2.46509` Chr`9` : `84,293,453`	0.000	1.000	0.000
rs10120372 lBF = `0.237676` Chr`9` : `108,440,542`	0.000	1.000	0.000
rs649057 lBF = `0.130024` Chr`9` : `102,234,323`	0.000	1.000	0.000
rs12380424 lBF = `0.099035` Chr`9` : `131,403,221`	0.000	1.000	0.000
rs291272 lBF = `0.0890106` Chr`9` : `10,043,014`	0.000	1.000	0.000
rs79156074 lBF = `0.076147` Chr`9` : `16,000,235`	0.000	1.000	0.000
rs1332366 lBF = `0.068304` Chr`9` : `77,832,575`	0.000	1.000	0.000
rs3758354 lBF = `0.035668` Chr`9` : `75,764,565`	0.000	1.000	0.000
rs872863 lBF = `-0.0302781` Chr`9` : `126,154,354`	0.000	1.000	0.000
rs4149263 lBF = `-0.0331005` Chr`9` : `107,677,289`	0.000	1.000	0.000
rs861189 lBF = `-0.0358512` Chr`9` : `22,185,252`	0.000	1.000	0.000
rs2889829 lBF = `-0.06427` Chr`9` : `27,610,657`	0.000	1.000	0.000
rs7866503 lBF = `386.896` Chr`9` : `22,091,924`	0.000	1.000	0.000
rs6586 lBF = `13.6487` Chr`9` : `100,666,931`	0.000	1.000	0.000
rs75864858 lBF = `12.2329` Chr`9` : `20,141,558`	0.000	1.000	0.000
rs643531 lBF = `11.8826` Chr`9` : `15,296,034`	0.000	1.000	0.000
rs1887428 lBF = `11.0147` Chr`9` : `4,984,530`	0.000	1.000	0.000
rs751173 lBF = `9.36707` Chr`9` : `21,707,372`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9894

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9772

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9474

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.9215

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9206

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.8166

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.8140

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.7668

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.7433

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.6393

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.6141

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.6047

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.5474

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.5389

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.5322

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.5093

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.4920

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.4916

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.4667

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.3839

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.3518

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.3302

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.3085

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.3033

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.2565

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.2296

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2254

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.2104

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.1711

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.1706

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.1289

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.1280

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.0786

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0630

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.0523

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)