Variant effects
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Results table
Variant
Risk posterior probability
No effect posterior probability
Protective posterior probability
rs117172015
lBF = 17.2619
Chr22
: 48,636,428
0.969
0.031
0.000
rs45552035
lBF = 17.8512
Chr22
: 28,175,232
0.934
0.066
0.000
rs73154143
lBF = 22.4344
Chr22
: 26,354,531
0.919
0.081
0.000
rs117666218
lBF = 19.7467
Chr22
: 26,580,013
0.884
0.116
0.000
rs8142548
lBF = 11.8001
Chr22
: 37,365,039
0.841
0.159
0.000
rs11705604
lBF = 21.7702
Chr22
: 43,719,422
0.825
0.175
0.000
rs138243
lBF = 13.8285
Chr22
: 50,564,750
0.790
0.210
0.000
rs77443150
lBF = 15.8315
Chr22
: 49,290,992
0.779
0.221
0.000
rs73171291
lBF = 12.2662
Chr22
: 45,904,019
0.773
0.227
0.000
rs190040215
lBF = 4.17884
Chr22
: 45,274,546
0.754
0.246
0.000
rs73384554
lBF = 13.3131
Chr22
: 18,320,739
0.738
0.262
0.000
rs12157904
lBF = 0.988134
Chr22
: 37,982,012
0.683
0.317
0.000
rs111965080
lBF = 25.4614
Chr22
: 28,962,094
0.676
0.324
0.000
rs9617470
lBF = 17.1626
Chr22
: 49,210,125
0.643
0.357
0.000
rs75972762
lBF = 14.0091
Chr22
: 27,621,252
0.600
0.400
0.000
rs7286215
lBF = 15.0684
Chr22
: 28,397,709
0.595
0.405
0.000
rs138851
lBF = 5.14095
Chr22
: 50,193,636
0.547
0.453
0.000
rs77885044
lBF = 15.7004
Chr22
: 28,501,414
0.525
0.475
0.000
rs910797
lBF = 7.17595
Chr22
: 50,277,883
0.520
0.480
0.000
rs76119306
lBF = 14.2002
Chr22
: 46,860,872
0.516
0.484
0.000
rs140112498
lBF = 18.6032
Chr22
: 38,026,059
0.445
0.555
0.000
rs5761960
lBF = 17.4635
Chr22
: 27,491,363
0.383
0.617
0.000
rs139509979
lBF = 0.454749
Chr22
: 33,585,148
0.373
0.627
0.000
rs910798
lBF = 8.72513
Chr22
: 50,278,438
0.364
0.636
0.000
Affx-19812848
lBF = 7.86531
Chr22
: 50,319,079
0.327
0.673
0.000
rs77684214
lBF = 11.7871
Chr22
: 22,519,071
0.321
0.679
0.000
rs116876575
lBF = 16.1237
Chr22
: 49,899,208
0.307
0.693
0.000
rs78676969
lBF = 7.12915
Chr22
: 50,319,170
0.306
0.694
0.000
rs117678708
lBF = 8.2297
Chr22
: 31,486,607
0.272
0.728
0.000
rs138840
lBF = 6.0293
Chr22
: 50,181,915
0.268
0.732
0.000
rs17806562
lBF = 12.277
Chr22
: 17,450,247
0.264
0.735
0.000
rs4821318
lBF = 8.96704
Chr22
: 35,327,772
0.263
0.737
0.000
rs117513935
lBF = 14.1355
Chr22
: 32,923,673
0.259
0.741
0.000
rs142030651
lBF = 17.2897
Chr22
: 41,513,727
0.259
0.741
0.000
rs79975430
lBF = 7.04866
Chr22
: 18,333,639
0.224
0.776
0.000
rs17648606
lBF = 18.9469
Chr22
: 30,516,469
0.207
0.793
0.000
rs410285
lBF = 1.14403
Chr22
: 22,381,768
0.202
0.798
0.000
rs62231188
lBF = 17.7829
Chr22
: 24,984,215
0.179
0.821
0.000
rs149693590
lBF = 7.52806
Chr22
: 31,976,149
0.172
0.828
0.000
rs78858203
lBF = 14.4759
Chr22
: 29,625,946
0.172
0.828
0.000
rs118118953
lBF = 13.9369
Chr22
: 34,002,123
0.170
0.830
0.000
rs56253436
lBF = 5.26182
Chr22
: 40,855,131
0.168
0.832
0.000
rs80084511
lBF = 7.45888
Chr22
: 36,704,700
0.165
0.835
0.000
rs117082835
lBF = 20.3366
Chr22
: 27,493,062
0.151
0.848
0.000
rs74805376
lBF = 13.9121
Chr22
: 25,978,464
0.140
0.860
0.000
rs28659842
lBF = 12.442
Chr22
: 24,776,451
0.136
0.864
0.000
rs73156729
lBF = 24.0018
Chr22
: 31,319,187
0.135
0.865
0.000
rs73177040
lBF = 26.055
Chr22
: 46,625,638
0.127
0.873
0.000
rs74823263
lBF = 20.2627
Chr22
: 43,347,699
0.126
0.874
0.000
rs41262444
lBF = 14.5044
Chr22
: 25,959,702
0.111
0.889
0.000
rs76569725
lBF = 15.2089
Chr22
: 26,383,294
0.098
0.901
0.000
rs11703595
lBF = 21.9358
Chr22
: 29,685,163
0.094
0.906
0.000
rs62239058
lBF = 15.647
Chr22
: 32,643,460
0.093
0.907
0.000
rs41278851
lBF = 11.6082
Chr22
: 30,094,366
0.092
0.908
0.000
rs11090206
lBF = 13.1737
Chr22
: 20,881,678
0.092
0.908
0.000
rs62239049
lBF = 16.4894
Chr22
: 32,628,900
0.086
0.913
0.000
rs9621532
lBF = 0.076712
Chr22
: 33,084,511
0.083
0.917
0.000
rs17003074
lBF = 14.5856
Chr22
: 42,817,666
0.079
0.921
0.000
rs74754583
lBF = 14.7953
Chr22
: 20,861,290
0.074
0.926
0.000
rs117641416
lBF = 30.5709
Chr22
: 51,123,287
0.072
0.928
0.000
rs62235996
lBF = 12.7384
Chr22
: 38,041,015
0.070
0.930
0.000
rs138812
lBF = 5.52275
Chr22
: 50,160,983
0.070
0.930
0.000
rs9608465
lBF = 8.83361
Chr22
: 26,557,408
0.067
0.933
0.000
rs144191434
lBF = 3.26906
Chr22
: 20,004,100
0.061
0.937
0.002
rs80088139
lBF = 2.75776
Chr22
: 48,923,459
0.060
0.940
0.000
rs78060012
lBF = 18.2526
Chr22
: 46,499,106
0.053
0.947
0.000
rs11702983
lBF = 16.3059
Chr22
: 29,737,071
0.051
0.949
0.000
rs9625963
lBF = 14.9391
Chr22
: 44,327,219
0.046
0.954
0.000
rs76976907
lBF = 8.94995
Chr22
: 48,387,302
0.040
0.960
0.000
rs12628854
lBF = 0.0944742
Chr22
: 19,289,715
0.034
0.966
0.000
rs11913358
lBF = 21.5562
Chr22
: 18,288,040
0.033
0.967
0.000
rs150927461
lBF = 0.0405878
Chr22
: 48,494,653
0.029
0.970
0.000
rs56113960
lBF = 17.1557
Chr22
: 21,355,501
0.027
0.973
0.000
rs71330778
lBF = 9.66342
Chr22
: 45,444,397
0.024
0.976
0.000
rs16998069
lBF = 3.34861
Chr22
: 23,494,926
0.023
0.977
0.000
rs118021477
lBF = 12.0694
Chr22
: 44,389,518
0.021
0.979
0.000
rs12628463
lBF = 0.0519789
Chr22
: 19,388,809
0.020
0.980
0.000
rs67947502
lBF = 0.0183611
Chr22
: 30,487,259
0.019
0.981
0.000
rs75911208
lBF = 8.932
Chr22
: 39,905,549
0.014
0.986
0.000
rs35010022
lBF = 11.7386
Chr22
: 41,045,892
0.010
0.990
0.000
rs112090150
lBF = 14.7051
Chr22
: 46,270,236
0.009
0.991
0.000
rs2413143
lBF = 0.0646862
Chr22
: 33,056,859
0.008
0.992
0.000
rs138880
lBF = 0.0149815
Chr22
: 50,218,611
0.008
0.992
0.000
rs13447287
lBF = 0.01543
Chr22
: 19,506,124
0.006
0.994
0.000
rs62225901
lBF = 13.6826
Chr22
: 46,505,819
0.006
0.994
0.000
rs62231069
lBF = 7.8836
Chr22
: 45,469,482
0.005
0.995
0.000
rs17879961
lBF = 0.00642728
Chr22
: 29,121,087
0.005
0.995
0.000
rs4822410
lBF = 0.0510133
Chr22
: 23,765,265
0.005
0.995
0.000
rs5992105
lBF = 10.7108
Chr22
: 18,283,247
0.005
0.995
0.000
rs1001021
lBF = 0.00306894
Chr22
: 26,403,599
0.005
0.995
0.000
rs79661460
lBF = 14.8033
Chr22
: 45,380,889
0.005
0.995
0.000
rs2413121
lBF = 7.58938
Chr22
: 32,895,978
0.005
0.995
0.000
rs2267386
lBF = 5.19951
Chr22
: 38,832,112
0.002
0.996
0.002
rs28372448
lBF = 0.0051555
Chr22
: 50,350,971
0.004
0.996
0.000
rs112059289
lBF = -0.00694887
Chr22
: 36,298,862
0.000
0.997
0.003
rs8140645
lBF = 12.7734
Chr22
: 18,289,555
0.003
0.997
0.000
rs28613901
lBF = 12.234
Chr22
: 45,260,956
0.003
0.997
0.000
rs149411586
lBF = 0.0107542
Chr22
: 32,351,292
0.002
0.998
0.000
rs132390
lBF = 1.09265
Chr22
: 29,621,477
0.000
0.998
0.002
rs5752209
lBF = 1.88224
Chr22
: 26,189,657
0.001
0.999
0.000
rs17000918
lBF = 0.00067283
Chr22
: 49,812,502
0.001
0.999
0.000
rs34242703
lBF = 10.2176
Chr22
: 45,225,346
0.001
0.999
0.000
rs117496069
lBF = 0.00009905
Chr22
: 37,405,662
0.001
0.999
0.000
rs180803
lBF = 0.319088
Chr22
: 24,658,858
0.001
0.999
0.000
rs183544847
lBF = 0
Chr22
: 38,991,553
0.001
0.999
0.001
rs1137256
lBF = 0
Chr22
: 42,968,514
0.001
0.999
0.001
rs182382461
lBF = 0
Chr22
: 22,358,941
0.001
0.999
0.001
rs149157446
lBF = 0
Chr22
: 44,305,574
0.001
0.999
0.001
rs79384503
lBF = 0
Chr22
: 22,047,969
0.001
0.999
0.001
rs10048897
lBF = -0.00064773
Chr22
: 18,260,704
0.000
0.999
0.000
rs11705126
lBF = 0.801943
Chr22
: 27,915,946
0.001
0.999
0.000
rs71331230
lBF = -0.00130583
Chr22
: 30,609,211
0.001
0.999
0.000
rs5763911
lBF = -0.0227399
Chr22
: 20,797,289
0.001
0.999
0.000
rs16985179
lBF = 0.13392
Chr22
: 28,029,538
0.001
0.999
0.000
rs1076540
lBF = 0.248355
Chr22
: 18,439,958
0.001
0.999
0.000
rs1978968
lBF = 0.289229
Chr22
: 18,448,113
0.001
0.999
0.000
rs6001930
lBF = 5.21695
Chr22
: 40,876,234
0.001
0.999
0.000
rs5751452
lBF = 0.150623
Chr22
: 43,635,573
0.001
0.999
0.000
rs62227724
lBF = 0.0758825
Chr22
: 44,523,907
0.000
1.000
0.000
rs2267193
lBF = 0.00897394
Chr22
: 33,746,526
0.000
1.000
0.000
rs6001932
lBF = 5.97524
Chr22
: 40,877,635
0.000
1.000
0.000
rs2283873
lBF = 0.00255327
Chr22
: 31,013,296
0.000
1.000
0.000
rs5752223
lBF = 1.45541
Chr22
: 26,207,910
0.000
1.000
0.000
rs5746647
lBF = 0.0115385
Chr22
: 17,057,138
0.000
1.000
0.000
rs143863913
lBF = 0.0233592
Chr22
: 33,489,111
0.000
1.000
0.000
rs12484776
lBF = -0.015354
Chr22
: 40,652,873
0.000
1.000
0.000
rs8184969
lBF = 1.45693
Chr22
: 26,204,552
0.000
1.000
0.000
rs13053505
lBF = 0.345698
Chr22
: 39,245,618
0.000
1.000
0.000
rs13054085
lBF = 0.0541055
Chr22
: 48,630,184
0.000
1.000
0.000
rs701428
lBF = -0.0213852
Chr22
: 20,228,542
0.000
1.000
0.000
rs77049423
lBF = 0.00316269
Chr22
: 23,628,739
0.000
1.000
0.000
rs5756504
lBF = 0.299751
Chr22
: 37,467,270
0.000
1.000
0.000
rs926937
lBF = -0.059769
Chr22
: 27,929,853
0.000
1.000
0.000
rs5756506
lBF = 0.442918
Chr22
: 37,467,392
0.000
1.000
0.000
rs8140172
lBF = -0.00137143
Chr22
: 44,204,319
0.000
1.000
0.000
rs6001832
lBF = 0.207048
Chr22
: 40,592,214
0.000
1.000
0.000
rs17002034
lBF = 7.44173
Chr22
: 40,996,367
0.000
1.000
0.000
rs2075277
lBF = 0.205489
Chr22
: 21,382,482
0.000
1.000
0.000
rs75617873
lBF = 0.181826
Chr22
: 44,526,105
0.000
1.000
0.000
rs5763662
lBF = 0.00195181
Chr22
: 30,378,703
0.000
1.000
0.000
rs10483182
lBF = -0.0132389
Chr22
: 35,135,106
0.000
1.000
0.000
rs2283792
lBF = -0.0197948
Chr22
: 22,131,125
0.000
1.000
0.000
rs17002030
lBF = 7.24142
Chr22
: 40,989,374
0.000
1.000
0.000
rs9627183
lBF = 0.171782
Chr22
: 48,284,514
0.000
1.000
0.000
rs8141797
lBF = -0.00570029
Chr22
: 24,582,041
0.000
1.000
0.000
rs146267024
lBF = 0.342848
Chr22
: 50,722,939
0.000
1.000
0.000
rs2106139
lBF = 0.115532
Chr22
: 19,565,257
0.000
1.000
0.000
rs1476029
lBF = 0.106987
Chr22
: 36,517,932
0.000
1.000
0.000
rs141503849
lBF = 0.0241071
Chr22
: 19,691,893
0.000
1.000
0.000
rs7289126
lBF = -0.0573819
Chr22
: 38,628,306
0.000
1.000
0.000
rs16982515
lBF = 0.480481
Chr22
: 27,041,283
0.000
1.000
0.000
rs150663730
lBF = 0.0134999
Chr22
: 33,827,478
0.000
1.000
0.000
rs149318287
lBF = 0.0116317
Chr22
: 33,825,468
0.000
1.000
0.000
rs16982689
lBF = 0.00249455
Chr22
: 22,436,319
0.000
1.000
0.000
rs17651189
lBF = -0.0110603
Chr22
: 24,844,883
0.000
1.000
0.000
rs5995441
lBF = -0.0809395
Chr22
: 37,921,674
0.000
1.000
0.000
rs999719
lBF = 1.58217
Chr22
: 34,264,838
0.000
1.000
0.000
rs16993271
lBF = 0.0193084
Chr22
: 34,307,851
0.000
1.000
0.000
rs9608102
lBF = -0.00002127
Chr22
: 23,644,794
0.000
1.000
0.000
rs62238885
lBF = -0.00625314
Chr22
: 32,138,138
0.000
1.000
0.000
rs2540647
lBF = -0.0639362
Chr22
: 18,966,617
0.000
1.000
0.000
rs131654
lBF = -0.0727738
Chr22
: 21,917,190
0.000
1.000
0.000
rs17001868
lBF = 1.8285
Chr22
: 40,778,231
0.000
1.000
0.000
rs9607469
lBF = 0.0726393
Chr22
: 37,919,267
0.000
1.000
0.000
rs77206040
lBF = -0.00758649
Chr22
: 44,471,123
0.000
1.000
0.000
rs9607791
lBF = -0.0332456
Chr22
: 41,694,388
0.000
1.000
0.000
rs139909
lBF = -0.0378696
Chr22
: 40,697,581
0.000
1.000
0.000
rs2023634
lBF = -0.0584025
Chr22
: 18,972,450
0.000
1.000
0.000
rs56091001
lBF = -0.071908
Chr22
: 50,346,042
0.000
1.000
0.000
rs5757949
lBF = -0.116045
Chr22
: 40,820,151
0.000
1.000
0.000
rs3788556
lBF = -0.137897
Chr22
: 39,972,162
0.000
1.000
0.000
rs2413583
lBF = 6.31604
Chr22
: 39,659,773
0.000
1.000
0.000
rs2143178
lBF = 5.79139
Chr22
: 39,660,829
0.000
1.000
0.000
rs9627403
lBF = 5.53312
Chr22
: 46,448,476
0.000
1.000
0.000
rs8135828
lBF = 1.77947
Chr22
: 29,929,239
0.000
1.000
0.000
rs2238732
lBF = 1.16539
Chr22
: 18,915,347
0.000
1.000
0.000
rs4822024
lBF = 0.985029
Chr22
: 41,757,647
0.000
1.000
0.000
rs68043594
lBF = 0.344341
Chr22
: 27,993,417
0.000
1.000
0.000
rs5762311
lBF = 0.250694
Chr22
: 28,090,207
0.000
1.000
0.000
rs8135665
lBF = 0.181541
Chr22
: 38,476,276
0.000
1.000
0.000
rs73394838
lBF = 0.109521
Chr22
: 30,225,973
0.000
1.000
0.000
rs412050
lBF = 0.0874464
Chr22
: 22,307,519
0.000
1.000
0.000
rs5747035
lBF = 0.0798043
Chr22
: 17,718,606
0.000
1.000
0.000
rs738322
lBF = 0.0783808
Chr22
: 38,569,006
0.000
1.000
0.000
rs55728055
lBF = 0.0609935
Chr22
: 32,093,268
0.000
1.000
0.000
rs9615264
lBF = 0.0382201
Chr22
: 46,632,589
0.000
1.000
0.000
rs16989760
lBF = 0.0366584
Chr22
: 31,951,808
0.000
1.000
0.000
rs12159200
lBF = 0.025189
Chr22
: 41,042,091
0.000
1.000
0.000
rs2072883
lBF = 0.00343165
Chr22
: 43,435,668
0.000
1.000
0.000
rs6005807
lBF = 0.00031687
Chr22
: 28,934,313
0.000
1.000
0.000
rs4820834
lBF = -0.00955864
Chr22
: 30,751,627
0.000
1.000
0.000
rs5770917
lBF = -0.0118017
Chr22
: 51,017,353
0.000
1.000
0.000
rs6000762
lBF = -0.0132974
Chr22
: 37,918,472
0.000
1.000
0.000
rs62236223
lBF = -0.0183634
Chr22
: 31,863,554
0.000
1.000
0.000
rs144960271
lBF = -0.0210795
Chr22
: 41,389,785
0.000
1.000
0.000
rs5752326
lBF = -0.0295582
Chr22
: 26,843,990
0.000
1.000
0.000
rs1930961
lBF = -0.0313722
Chr22
: 25,875,265
0.000
1.000
0.000
rs7287939
lBF = -0.0355655
Chr22
: 41,396,353
0.000
1.000
0.000
rs7290192
lBF = -0.0428414
Chr22
: 49,318,526
0.000
1.000
0.000
rs4824093
lBF = -0.0530357
Chr22
: 50,128,268
0.000
1.000
0.000
rs2540641
lBF = -0.0569518
Chr22
: 18,959,684
0.000
1.000
0.000
rs6002655
lBF = -0.0701394
Chr22
: 42,603,814
0.000
1.000
0.000
rs5757717
lBF = -0.0914033
Chr22
: 39,942,234
0.000
1.000
0.000
rs5769765
lBF = -0.100685
Chr22
: 50,271,176
0.000
1.000
0.000
rs4820599
lBF = -0.101277
Chr22
: 24,990,213
0.000
1.000
0.000
rs9611198
lBF = -0.136357
Chr22
: 39,955,873
0.000
1.000
0.000
rs62228062
lBF = 150.849
Chr22
: 46,381,234
0.000
1.000
0.000
rs9330811
lBF = 97.7604
Chr22
: 46,362,396
0.000
1.000
0.000
rs28628653
lBF = 67.1296
Chr22
: 46,396,925
0.000
1.000
0.000
rs62228064
lBF = 63.223
Chr22
: 46,381,414
0.000
1.000
0.000
rs738409
lBF = 54.3962
Chr22
: 44,324,727
0.000
1.000
0.000
rs6519955
lBF = 33.5214
Chr22
: 46,421,842
0.000
1.000
0.000
rs28542066
lBF = 32.5751
Chr22
: 46,414,664
0.000
1.000
0.000
rs28520003
lBF = 32.0593
Chr22
: 46,411,969
0.000
1.000
0.000
rs12170295
lBF = 31.7925
Chr22
: 46,420,465
0.000
1.000
0.000
rs4823173
lBF = 31.1034
Chr22
: 44,328,730
0.000
1.000
0.000
rs12483959
lBF = 30.8217
Chr22
: 44,325,996
0.000
1.000
0.000
rs2281135
lBF = 28.0955
Chr22
: 44,332,570
0.000
1.000
0.000
rs2896019
lBF = 27.9863
Chr22
: 44,333,694
0.000
1.000
0.000
Affx-19716376
lBF = 27.9071
Chr22
: 44,332,888
0.000
1.000
0.000
rs9626908
lBF = 25.878
Chr22
: 46,428,306
0.000
1.000
0.000
rs116000286
lBF = 25.5967
Chr22
: 46,375,013
0.000
1.000
0.000
rs8137243
lBF = 23.6201
Chr22
: 46,443,835
0.000
1.000
0.000
rs3761472
lBF = 21.1843
Chr22
: 44,368,122
0.000
1.000
0.000
rs9627368
lBF = 18.7048
Chr22
: 46,445,002
0.000
1.000
0.000
rs1007863
lBF = 15.6643
Chr22
: 44,395,451
0.000
1.000
0.000
rs2235776
lBF = 14.8289
Chr22
: 44,377,999
0.000
1.000
0.000
rs5759167
lBF = 9.72242
Chr22
: 43,500,212
0.000
1.000
0.000
rs28698504
lBF = 9.62339
Chr22
: 46,403,715
0.000
1.000
0.000
rs9627391
lBF = 8.0719
Chr22
: 46,447,097
0.000
1.000
0.000
rs4077498
lBF = 7.88596
Chr22
: 46,394,928
0.000
1.000
0.000
rs229541
lBF = 7.70096
Chr22
: 37,591,318
0.000
1.000
0.000
rs3788338
lBF = 7.28112
Chr22
: 23,412,058
0.000
1.000
0.000
rs229527
lBF = 7.23294
Chr22
: 37,581,485
0.000
1.000
0.000
rs2143571
lBF = 7.12354
Chr22
: 44,391,686
0.000
1.000
0.000
rs3827385
lBF = 6.9071
Chr22
: 44,388,817
0.000
1.000
0.000
rs2073080
lBF = 6.61989
Chr22
: 44,394,402
0.000
1.000
0.000
rs229526
lBF = 6.44076
Chr22
: 37,581,422
0.000
1.000
0.000
rs5748415
lBF = 6.07569
Chr22
: 19,729,424
0.000
1.000
0.000
rs7292297
lBF = 5.46774
Chr22
: 46,458,123
0.000
1.000
0.000
rs968451
lBF = 4.68478
Chr22
: 39,670,851
0.000
1.000
0.000
rs855791
lBF = 4.53368
Chr22
: 37,462,936
0.000
1.000
0.000
rs2412970
lBF = 4.44025
Chr22
: 30,486,826
0.000
1.000
0.000
rs5763767
lBF = 4.40784
Chr22
: 30,493,882
0.000
1.000
0.000
rs2412973
lBF = 4.40452
Chr22
: 30,529,631
0.000
1.000
0.000
rs2412971
lBF = 4.40088
Chr22
: 30,494,371
0.000
1.000
0.000
rs1003342
lBF = 4.38421
Chr22
: 30,570,022
0.000
1.000
0.000
rs713875
lBF = 4.08209
Chr22
: 30,592,487
0.000
1.000
0.000
rs137699
lBF = 3.88767
Chr22
: 39,748,854
0.000
1.000
0.000
rs5762430
lBF = 3.21338
Chr22
: 28,378,472
0.000
1.000
0.000
rs12627970
lBF = 2.81662
Chr22
: 39,721,745
0.000
1.000
0.000
rs2413450
lBF = 2.74539
Chr22
: 37,470,224
0.000
1.000
0.000
rs4820268
lBF = 2.51794
Chr22
: 37,469,591
0.000
1.000
0.000
rs5753037
lBF = 2.17178
Chr22
: 30,581,722
0.000
1.000
0.000
rs3761445
lBF = 2.14332
Chr22
: 38,595,411
0.000
1.000
0.000
rs6000782
lBF = 1.85982
Chr22
: 37,928,186
0.000
1.000
0.000
rs2412980
lBF = 1.56742
Chr22
: 30,592,069
0.000
1.000
0.000
rs909685
lBF = 1.33857
Chr22
: 39,747,671
0.000
1.000
0.000
rs2069235
lBF = 1.31802
Chr22
: 39,747,780
0.000
1.000
0.000
rs12628403
lBF = 1.30847
Chr22
: 39,358,037
0.000
1.000
0.000
rs2239815
lBF = 1.30554
Chr22
: 29,192,670
0.000
1.000
0.000
rs6010044
lBF = 1.29431
Chr22
: 51,101,938
0.000
1.000
0.000
rs5766691
lBF = 1.25323
Chr22
: 47,532,396
0.000
1.000
0.000
rs5765956
lBF = 1.11634
Chr22
: 45,150,659
0.000
1.000
0.000
rs2284033
lBF = 0.816696
Chr22
: 37,534,034
0.000
1.000
0.000
rs5758511
lBF = 0.804358
Chr22
: 42,336,172
0.000
1.000
0.000
rs11914070
lBF = 0.672153
Chr22
: 18,965,628
0.000
1.000
0.000
rs137686
lBF = 0.583681
Chr22
: 39,739,638
0.000
1.000
0.000
rs4821116
lBF = 0.550126
Chr22
: 21,973,319
0.000
1.000
0.000
rs5754344
lBF = 0.515061
Chr22
: 21,963,786
0.000
1.000
0.000
rs2266961
lBF = 0.510957
Chr22
: 21,928,597
0.000
1.000
0.000
rs1034566
lBF = 0.496841
Chr22
: 19,984,277
0.000
1.000
0.000
rs2294369
lBF = 0.474385
Chr22
: 40,075,400
0.000
1.000
0.000
rs2256609
lBF = 0.471493
Chr22
: 21,925,017
0.000
1.000
0.000
rs10453441
lBF = 0.465801
Chr22
: 46,363,739
0.000
1.000
0.000
rs2266959
lBF = 0.458235
Chr22
: 21,922,904
0.000
1.000
0.000
rs727563
lBF = 0.457157
Chr22
: 41,867,377
0.000
1.000
0.000
rs1004689
lBF = 0.410395
Chr22
: 48,651,997
0.000
1.000
0.000
rs4820408
lBF = 0.37288
Chr22
: 40,604,945
0.000
1.000
0.000
rs75347843
lBF = 0.370509
Chr22
: 51,112,361
0.000
1.000
0.000
rs5754638
lBF = 0.354417
Chr22
: 34,078,057
0.000
1.000
0.000
rs4820539
lBF = 0.351856
Chr22
: 23,477,970
0.000
1.000
0.000
rs140174
lBF = 0.351469
Chr22
: 23,922,983
0.000
1.000
0.000
rs7286472
lBF = 0.337432
Chr22
: 34,386,473
0.000
1.000
0.000
rs4253772
lBF = 0.312741
Chr22
: 46,627,603
0.000
1.000
0.000
rs12530
lBF = 0.291577
Chr22
: 32,783,904
0.000
1.000
0.000
rs2413045
lBF = 0.288189
Chr22
: 31,665,862
0.000
1.000
0.000
rs1065852
lBF = 0.287641
Chr22
: 42,526,694
0.000
1.000
0.000
rs6005551
lBF = 0.277431
Chr22
: 28,053,797
0.000
1.000
0.000
rs6003958
lBF = 0.25855
Chr22
: 24,264,089
0.000
1.000
0.000
rs2298428
lBF = 0.226713
Chr22
: 21,982,892
0.000
1.000
0.000
rs4821112
lBF = 0.188535
Chr22
: 21,964,761
0.000
1.000
0.000
rs2283790
lBF = 0.188367
Chr22
: 21,956,653
0.000
1.000
0.000
rs7444
lBF = 0.183526
Chr22
: 21,976,934
0.000
1.000
0.000
rs181359
lBF = 0.183435
Chr22
: 21,928,641
0.000
1.000
0.000
rs181362
lBF = 0.170323
Chr22
: 21,932,068
0.000
1.000
0.000
rs5754217
lBF = 0.156372
Chr22
: 21,939,675
0.000
1.000
0.000
rs134871
lBF = 0.142175
Chr22
: 42,652,716
0.000
1.000
0.000
rs738722
lBF = 0.135046
Chr22
: 29,130,012
0.000
1.000
0.000
rs877529
lBF = 0.13465
Chr22
: 39,542,292
0.000
1.000
0.000
rs16986825
lBF = 0.132453
Chr22
: 29,300,306
0.000
1.000
0.000
rs138597
lBF = 0.120585
Chr22
: 44,968,530
0.000
1.000
0.000
rs1033667
lBF = 0.118625
Chr22
: 29,130,300
0.000
1.000
0.000
rs4823006
lBF = 0.117798
Chr22
: 29,451,671
0.000
1.000
0.000
rs1014971
lBF = 0.0985512
Chr22
: 39,332,623
0.000
1.000
0.000
rs3218255
lBF = 0.0957903
Chr22
: 37,544,486
0.000
1.000
0.000
rs9616906
lBF = 0.0911128
Chr22
: 51,104,680
0.000
1.000
0.000
rs13058467
lBF = 0.0850959
Chr22
: 43,579,049
0.000
1.000
0.000
rs11705555
lBF = 0.0806388
Chr22
: 28,206,912
0.000
1.000
0.000
rs2277844
lBF = 0.0787746
Chr22
: 38,577,515
0.000
1.000
0.000
rs13053817
lBF = 0.0781188
Chr22
: 29,847,722
0.000
1.000
0.000
rs2284063
lBF = 0.0780543
Chr22
: 38,544,298
0.000
1.000
0.000
rs6004862
lBF = 0.0777455
Chr22
: 26,378,073
0.000
1.000
0.000
rs1207393
lBF = 0.0775842
Chr22
: 26,653,362
0.000
1.000
0.000
rs5994434
lBF = 0.0751862
Chr22
: 32,229,649
0.000
1.000
0.000
rs6001027
lBF = 0.0686601
Chr22
: 38,545,619
0.000
1.000
0.000
rs4821083
lBF = 0.068578
Chr22
: 33,056,341
0.000
1.000
0.000
rs2142694
lBF = 0.0664218
Chr22
: 42,542,870
0.000
1.000
0.000
rs133047
lBF = 0.0609113
Chr22
: 41,027,819
0.000
1.000
0.000
rs742004
lBF = 0.057125
Chr22
: 27,435,820
0.000
1.000
0.000
rs1062753
lBF = 0.0539761
Chr22
: 42,392,811
0.000
1.000
0.000
rs55769859
lBF = 0.0444075
Chr22
: 46,353,046
0.000
1.000
0.000
rs34101942
lBF = 0.0422714
Chr22
: 39,563,912
0.000
1.000
0.000
rs470093
lBF = 0.0420045
Chr22
: 44,276,171
0.000
1.000
0.000
rs4821544
lBF = 0.0393448
Chr22
: 37,258,503
0.000
1.000
0.000
rs2075726
lBF = 0.039132
Chr22
: 37,310,046
0.000
1.000
0.000
rs2238776
lBF = 0.0344012
Chr22
: 19,757,892
0.000
1.000
0.000
rs9609565
lBF = 0.0341174
Chr22
: 32,867,528
0.000
1.000
0.000
rs10084630
lBF = 0.0339975
Chr22
: 37,679,487
0.000
1.000
0.000
rs739031
lBF = 0.0310772
Chr22
: 37,208,149
0.000
1.000
0.000
rs739310
lBF = 0.0296976
Chr22
: 27,051,299
0.000
1.000
0.000
rs73164810
lBF = 0.025675
Chr22
: 21,321,790
0.000
1.000
0.000
rs9626711
lBF = 0.019762
Chr22
: 47,686,103
0.000
1.000
0.000
rs9609078
lBF = 0.014673
Chr22
: 31,153,276
0.000
1.000
0.000
rs742134
lBF = 0.0123352
Chr22
: 43,518,275
0.000
1.000
0.000
rs5767218
lBF = 0.0109373
Chr22
: 46,879,314
0.000
1.000
0.000
rs3218251
lBF = 0.00957024
Chr22
: 37,545,505
0.000
1.000
0.000
rs3747093
lBF = 0.00944135
Chr22
: 21,984,379
0.000
1.000
0.000
rs4820255
lBF = 0.00867412
Chr22
: 37,209,296
0.000
1.000
0.000
rs735854
lBF = 0.00741103
Chr22
: 36,679,058
0.000
1.000
0.000
rs5771069
lBF = 0.00665707
Chr22
: 50,435,480
0.000
1.000
0.000
rs4911642
lBF = 0.00376293
Chr22
: 16,504,399
0.000
1.000
0.000
rs2739330
lBF = 0.00312184
Chr22
: 24,295,286
0.000
1.000
0.000
rs131788
lBF = 0.00271548
Chr22
: 50,976,754
0.000
1.000
0.000
rs1974653
lBF = 0.00261878
Chr22
: 20,134,350
0.000
1.000
0.000
rs36600
lBF = 0.00098495
Chr22
: 30,337,586
0.000
1.000
0.000
rs5771242
lBF = 0.00024019
Chr22
: 50,661,869
0.000
1.000
0.000
rs4821558
lBF = -0.00222886
Chr22
: 37,308,785
0.000
1.000
0.000
rs971768
lBF = -0.00299327
Chr22
: 17,597,462
0.000
1.000
0.000
rs137887
lBF = -0.00363212
Chr22
: 50,464,439
0.000
1.000
0.000
rs5754227
lBF = -0.00417423
Chr22
: 33,105,817
0.000
1.000
0.000
rs1811103
lBF = -0.00640802
Chr22
: 34,182,889
0.000
1.000
0.000
rs5749696
lBF = -0.00679886
Chr22
: 22,063,337
0.000
1.000
0.000
rs5756931
lBF = -0.00793616
Chr22
: 38,546,033
0.000
1.000
0.000
rs4821261
lBF = -0.00859297
Chr22
: 34,941,576
0.000
1.000
0.000
rs35532491
lBF = -0.0102996
Chr22
: 34,329,603
0.000
1.000
0.000
rs3804047
lBF = -0.010417
Chr22
: 19,879,637
0.000
1.000
0.000
rs400946
lBF = -0.011503
Chr22
: 21,431,054
0.000
1.000
0.000
rs2022068
lBF = -0.0120191
Chr22
: 37,199,806
0.000
1.000
0.000
rs5756813
lBF = -0.0141405
Chr22
: 38,175,477
0.000
1.000
0.000
rs4493363
lBF = -0.0149821
Chr22
: 35,144,411
0.000
1.000
0.000
rs5771040
lBF = -0.0156233
Chr22
: 50,902,390
0.000
1.000
0.000
rs2213770
lBF = -0.0158797
Chr22
: 27,244,685
0.000
1.000
0.000
rs6006893
lBF = -0.0169357
Chr22
: 45,253,895
0.000
1.000
0.000
rs7286601
lBF = -0.0179393
Chr22
: 51,121,416
0.000
1.000
0.000
rs133980
lBF = -0.018444
Chr22
: 28,022,728
0.000
1.000
0.000
rs10854554
lBF = -0.0191446
Chr22
: 19,610,682
0.000
1.000
0.000
rs2330809
lBF = -0.0206894
Chr22
: 25,002,081
0.000
1.000
0.000
rs1012068
lBF = -0.0210016
Chr22
: 32,265,903
0.000
1.000
0.000
rs6151429
lBF = -0.0226657
Chr22
: 51,063,477
0.000
1.000
0.000
rs4417
lBF = -0.0253634
Chr22
: 27,416,825
0.000
1.000
0.000
rs111383589
lBF = -0.0262582
Chr22
: 31,438,361
0.000
1.000
0.000
rs137115
lBF = -0.0266763
Chr22
: 43,011,403
0.000
1.000
0.000
rs9627735
lBF = -0.0269147
Chr22
: 49,842,289
0.000
1.000
0.000
rs2018293
lBF = -0.026998
Chr22
: 26,704,561
0.000
1.000
0.000
rs133911
lBF = -0.0281381
Chr22
: 44,523,162
0.000
1.000
0.000
rs1058172
lBF = -0.0294819
Chr22
: 42,523,528
0.000
1.000
0.000
rs5750250
lBF = -0.0296204
Chr22
: 36,708,483
0.000
1.000
0.000
rs2160908
lBF = -0.0316544
Chr22
: 37,586,792
0.000
1.000
0.000
rs35245641
lBF = -0.0329345
Chr22
: 46,473,845
0.000
1.000
0.000
rs4823246
lBF = -0.0340714
Chr22
: 45,011,761
0.000
1.000
0.000
rs738968
lBF = -0.0345607
Chr22
: 34,889,097
0.000
1.000
0.000
rs4821940
lBF = -0.0349389
Chr22
: 40,659,573
0.000
1.000
0.000
rs4819833
lBF = -0.0357712
Chr22
: 19,691,502
0.000
1.000
0.000
rs138777
lBF = -0.03609
Chr22
: 35,711,098
0.000
1.000
0.000
rs1043099
lBF = -0.0365254
Chr22
: 30,681,257
0.000
1.000
0.000
rs7364180
lBF = -0.0371186
Chr22
: 42,218,856
0.000
1.000
0.000
rs591044
lBF = -0.038171
Chr22
: 26,697,195
0.000
1.000
0.000
rs11089637
lBF = -0.0390982
Chr22
: 21,979,096
0.000
1.000
0.000
rs2294239
lBF = -0.0394551
Chr22
: 29,449,477
0.000
1.000
0.000
rs130575
lBF = -0.0397782
Chr22
: 34,859,793
0.000
1.000
0.000
rs144073979
lBF = -0.0402635
Chr22
: 18,886,814
0.000
1.000
0.000
rs5751901
lBF = -0.0403249
Chr22
: 24,992,266
0.000
1.000
0.000
rs54211
lBF = -0.0404144
Chr22
: 39,687,484
0.000
1.000
0.000
rs35934224
lBF = -0.0409583
Chr22
: 19,872,645
0.000
1.000
0.000
rs140522
lBF = -0.0416471
Chr22
: 50,971,266
0.000
1.000
0.000
rs2267138
lBF = -0.041799
Chr22
: 29,793,641
0.000
1.000
0.000
rs2235852
lBF = -0.0419029
Chr22
: 41,661,154
0.000
1.000
0.000
rs138740
lBF = -0.0437205
Chr22
: 35,699,582
0.000
1.000
0.000
rs134882
lBF = -0.0445834
Chr22
: 42,670,965
0.000
1.000
0.000
rs5764106
lBF = -0.045893
Chr22
: 44,561,287
0.000
1.000
0.000
rs139156
lBF = -0.0467441
Chr22
: 44,596,085
0.000
1.000
0.000
rs131814
lBF = -0.0469394
Chr22
: 50,960,101
0.000
1.000
0.000
rs738144
lBF = -0.0471695
Chr22
: 39,178,375
0.000
1.000
0.000
rs470119
lBF = -0.0478436
Chr22
: 50,966,914
0.000
1.000
0.000
rs1023500
lBF = -0.0481874
Chr22
: 42,340,844
0.000
1.000
0.000
rs7286917
lBF = -0.0492415
Chr22
: 39,860,868
0.000
1.000
0.000
rs6009824
lBF = -0.0510679
Chr22
: 50,086,373
0.000
1.000
0.000
rs5767992
lBF = -0.051089
Chr22
: 48,188,253
0.000
1.000
0.000
rs2239785
lBF = -0.0512348
Chr22
: 36,661,330
0.000
1.000
0.000
rs5749446
lBF = -0.0528213
Chr22
: 32,880,585
0.000
1.000
0.000
rs688034
lBF = -0.053714
Chr22
: 26,689,635
0.000
1.000
0.000
rs3788483
lBF = -0.0541366
Chr22
: 33,084,345
0.000
1.000
0.000
rs4680
lBF = -0.0550063
Chr22
: 19,951,271
0.000
1.000
0.000
rs12537
lBF = -0.055899
Chr22
: 30,423,460
0.000
1.000
0.000
rs1053593
lBF = -0.0560821
Chr22
: 35,660,875
0.000
1.000
0.000
rs130555
lBF = -0.0561236
Chr22
: 33,183,789
0.000
1.000
0.000
rs228916
lBF = -0.0565967
Chr22
: 37,505,552
0.000
1.000
0.000
rs5758659
lBF = -0.0570023
Chr22
: 42,622,003
0.000
1.000
0.000
rs3788567
lBF = -0.0570702
Chr22
: 40,006,035
0.000
1.000
0.000
rs138229
lBF = -0.0578564
Chr22
: 50,557,407
0.000
1.000
0.000
rs4822983
lBF = -0.0612462
Chr22
: 29,115,066
0.000
1.000
0.000
rs4821469
lBF = -0.0629789
Chr22
: 36,616,445
0.000
1.000
0.000
rs130318
lBF = -0.0638642
Chr22
: 44,476,064
0.000
1.000
0.000
rs2040771
lBF = -0.0641292
Chr22
: 19,161,935
0.000
1.000
0.000
rs7985
lBF = -0.0653009
Chr22
: 27,066,535
0.000
1.000
0.000
rs1210638
lBF = -0.0658566
Chr22
: 18,981,563
0.000
1.000
0.000
rs11089937
lBF = -0.0664504
Chr22
: 22,506,569
0.000
1.000
0.000
rs470089
lBF = -0.0665578
Chr22
: 44,248,504
0.000
1.000
0.000
rs7511006
lBF = -0.0665898
Chr22
: 50,676,259
0.000
1.000
0.000
rs743777
lBF = -0.068644
Chr22
: 37,551,607
0.000
1.000
0.000
rs5751614
lBF = -0.0697361
Chr22
: 23,593,051
0.000
1.000
0.000
rs2186369
lBF = -0.070956
Chr22
: 24,170,996
0.000
1.000
0.000
rs5757676
lBF = -0.073334
Chr22
: 39,841,700
0.000
1.000
0.000
rs3747113
lBF = -0.0741355
Chr22
: 24,717,518
0.000
1.000
0.000
rs1547014
lBF = -0.0743829
Chr22
: 29,100,711
0.000
1.000
0.000
rs6004262
lBF = -0.0747378
Chr22
: 25,155,143
0.000
1.000
0.000
rs2235682
lBF = -0.0748289
Chr22
: 36,983,428
0.000
1.000
0.000
rs2073398
lBF = -0.0752997
Chr22
: 24,999,104
0.000
1.000
0.000
rs2071748
lBF = -0.0754053
Chr22
: 35,777,618
0.000
1.000
0.000
rs131794
lBF = -0.0754748
Chr22
: 50,971,752
0.000
1.000
0.000
rs5748871
lBF = -0.0755929
Chr22
: 17,603,477
0.000
1.000
0.000
rs1034394
lBF = -0.0756216
Chr22
: 34,823,828
0.000
1.000
0.000
rs5751902
lBF = -0.0770706
Chr22
: 24,996,630
0.000
1.000
0.000
rs2008174
lBF = -0.0774191
Chr22
: 39,860,130
0.000
1.000
0.000
rs4141404
lBF = -0.0780888
Chr22
: 31,675,185
0.000
1.000
0.000
rs4820294
lBF = -0.0788716
Chr22
: 38,071,043
0.000
1.000
0.000
rs6003982
lBF = -0.0788765
Chr22
: 24,284,825
0.000
1.000
0.000
rs4820792
lBF = -0.0791374
Chr22
: 29,161,007
0.000
1.000
0.000
rs2106294
lBF = -0.0797405
Chr22
: 31,645,759
0.000
1.000
0.000
rs744016
lBF = -0.0798765
Chr22
: 27,042,106
0.000
1.000
0.000
rs6009527
lBF = -0.0799199
Chr22
: 49,570,587
0.000
1.000
0.000
rs117294
lBF = -0.0830501
Chr22
: 48,453,591
0.000
1.000
0.000
rs909674
lBF = -0.0838403
Chr22
: 39,859,169
0.000
1.000
0.000
rs139371
lBF = -0.0847461
Chr22
: 39,519,196
0.000
1.000
0.000
rs3959642
lBF = -0.0848042
Chr22
: 39,860,589
0.000
1.000
0.000
rs4646312
lBF = -0.0858072
Chr22
: 19,948,337
0.000
1.000
0.000
rs743793
lBF = -0.0868767
Chr22
: 33,561,746
0.000
1.000
0.000
rs4407
lBF = -0.0873291
Chr22
: 48,741,798
0.000
1.000
0.000
rs987710
lBF = -0.0876342
Chr22
: 22,512,415
0.000
1.000
0.000
rs4820425
lBF = -0.088309
Chr22
: 41,431,342
0.000
1.000
0.000
rs1985671
lBF = -0.088326
Chr22
: 45,961,904
0.000
1.000
0.000
rs41297816
lBF = -0.0902365
Chr22
: 19,763,978
0.000
1.000
0.000
rs5768709
lBF = -0.091008
Chr22
: 48,929,569
0.000
1.000
0.000
rs13053175
lBF = -0.0911913
Chr22
: 37,613,309
0.000
1.000
0.000
rs4821897
lBF = -0.09174
Chr22
: 39,835,587
0.000
1.000
0.000
rs9607782
lBF = -0.0927009
Chr22
: 41,587,556
0.000
1.000
0.000
rs5757673
lBF = -0.0937261
Chr22
: 39,837,920
0.000
1.000
0.000
rs9619497
lBF = -0.094133
Chr22
: 35,371,248
0.000
1.000
0.000
rs2076054
lBF = -0.0947958
Chr22
: 32,832,874
0.000
1.000
0.000
rs4821132
lBF = -0.0951207
Chr22
: 33,566,587
0.000
1.000
0.000
rs138249
lBF = -0.0952154
Chr22
: 50,569,790
0.000
1.000
0.000
rs9623117
lBF = -0.0974422
Chr22
: 40,452,119
0.000
1.000
0.000
rs58667
lBF = -0.0990538
Chr22
: 45,668,012
0.000
1.000
0.000
rs9611177
lBF = -0.0997286
Chr22
: 39,840,130
0.000
1.000
0.000
rs11704416
lBF = -0.10001
Chr22
: 40,436,973
0.000
1.000
0.000
rs136161
lBF = -0.101812
Chr22
: 36,657,432
0.000
1.000
0.000
rs6009583
lBF = -0.101983
Chr22
: 49,677,646
0.000
1.000
0.000
rs2016586
lBF = -0.10396
Chr22
: 36,125,264
0.000
1.000
0.000
rs807669
lBF = -0.107969
Chr22
: 19,154,522
0.000
1.000
0.000
rs712964
lBF = -0.109339
Chr22
: 19,156,117
0.000
1.000
0.000
rs139014
lBF = -0.111523
Chr22
: 43,624,765
0.000
1.000
0.000
rs5760748
lBF = -0.112051
Chr22
: 25,334,977
0.000
1.000
0.000
rs9616064
lBF = -0.113678
Chr22
: 46,982,293
0.000
1.000
0.000
rs131408
lBF = -0.117869
Chr22
: 23,890,836
0.000
1.000
0.000
rs3788317
lBF = -0.120619
Chr22
: 19,889,825
0.000
1.000
0.000
rs5754891
lBF = -0.122
Chr22
: 34,602,188
0.000
1.000
0.000
rs133885
lBF = -0.127946
Chr22
: 26,159,289
0.000
1.000
0.000
rs5761618
lBF = -0.130147
Chr22
: 26,993,706
0.000
1.000
0.000
rs5755703
lBF = -0.132854
Chr22
: 35,754,413
0.000
1.000
0.000
rs4822752
lBF = -0.144356
Chr22
: 27,011,420
0.000
1.000
0.000
This table lists the top 491 variants ordered by p(effect) .
The full results table can be downloaded from this page.
Variant clusters with highest protective effect
(posterior probability > 0.05 )
Variant clusters with highest risk effect
(posterior probability > 0.05 )