TreeWAS – [Z11.4] Special screening examination for human immunodeficiency virus [HIV]

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs9956738 lBF = `1.94999` Chr`18` : `49,940,973`	0.657	0.343	0.000
rs77126375 lBF = `14.4018` Chr`18` : `40,962,485`	0.570	0.430	0.000
rs75903686 lBF = `17.2493` Chr`18` : `31,898,334`	0.475	0.525	0.000
rs78723535 lBF = `19.594` Chr`18` : `65,161,477`	0.473	0.526	0.000
rs76719755 lBF = `19.161` Chr`18` : `66,910,435`	0.473	0.527	0.000
rs78076094 lBF = `17.3177` Chr`18` : `6,968,799`	0.472	0.528	0.000
rs79850769 lBF = `13.2202` Chr`18` : `12,373,469`	0.467	0.533	0.000
rs486743 lBF = `12.5321` Chr`18` : `12,505,089`	0.461	0.538	0.000
rs112424909 lBF = `17.4922` Chr`18` : `9,705,858`	0.443	0.557	0.000
rs41512245 lBF = `15.7775` Chr`18` : `73,278,094`	0.439	0.561	0.000
rs142176337 lBF = `1.89382` Chr`18` : `57,581,487`	0.434	0.566	0.000
rs76342601 lBF = `14.7362` Chr`18` : `42,826,367`	0.430	0.570	0.000
rs28417927 lBF = `12.3757` Chr`18` : `58,226,910`	0.416	0.584	0.000
rs79756656 lBF = `7.23885` Chr`18` : `77,530,785`	0.404	0.596	0.000
rs11872184 lBF = `3.70756` Chr`18` : `2,739,733`	0.381	0.618	0.000
rs74968339 lBF = `14.8939` Chr`18` : `52,753,199`	0.381	0.619	0.000
rs116929418 lBF = `14.6907` Chr`18` : `22,468,251`	0.379	0.621	0.000
rs78554423 lBF = `15.8567` Chr`18` : `27,227,214`	0.373	0.627	0.000
rs185818984 lBF = `3.06107` Chr`18` : `22,958,783`	0.369	0.631	0.000
rs62085423 lBF = `13.4303` Chr`18` : `4,459,889`	0.355	0.645	0.000
rs80008499 lBF = `15.2522` Chr`18` : `69,654,690`	0.351	0.649	0.000
rs118112796 lBF = `23.7546` Chr`18` : `76,442,139`	0.346	0.654	0.000
rs75729340 lBF = `21.0937` Chr`18` : `31,480,742`	0.344	0.656	0.000
rs117085966 lBF = `16.4406` Chr`18` : `33,048,129`	0.343	0.657	0.000
rs72874026 lBF = `19.9502` Chr`18` : `6,075,197`	0.326	0.673	0.000
rs8088922 lBF = `14.0675` Chr`18` : `6,976,513`	0.320	0.679	0.000
rs28496996 lBF = `0.602667` Chr`18` : `1,952,127`	0.318	0.682	0.000
rs140959648 lBF = `22.6332` Chr`18` : `59,005,176`	0.316	0.683	0.000
rs117744154 lBF = `14.3775` Chr`18` : `27,353,198`	0.306	0.693	0.000
rs35531140 lBF = `12.5071` Chr`18` : `41,157,177`	0.304	0.696	0.000
Affx-15339481 lBF = `11.0701` Chr`18` : `6,958,609`	0.281	0.718	0.000
rs77759352 lBF = `23.6884` Chr`18` : `19,521,256`	0.256	0.743	0.000
rs80226779 lBF = `18.8837` Chr`18` : `57,590,566`	0.251	0.749	0.000
rs79204427 lBF = `15.0146` Chr`18` : `47,693,130`	0.244	0.756	0.000
rs9963330 lBF = `1.29194` Chr`18` : `56,020,509`	0.238	0.762	0.000
rs79268501 lBF = `16.8497` Chr`18` : `55,979,238`	0.236	0.764	0.000
rs7226855 lBF = `66.7645` Chr`18` : `46,454,048`	0.000	0.779	0.221
rs11874392 lBF = `66.5982` Chr`18` : `46,453,156`	0.000	0.793	0.207
rs76037241 lBF = `15.2229` Chr`18` : `3,178,541`	0.193	0.807	0.000
rs356150 lBF = `0.411912` Chr`18` : `75,373,447`	0.193	0.807	0.000
rs78765259 lBF = `18.3432` Chr`18` : `42,749,311`	0.189	0.810	0.000
rs16976171 lBF = `1.75054` Chr`18` : `40,059,621`	0.187	0.813	0.000
rs3914785 lBF = `2.08326` Chr`18` : `2,452,177`	0.181	0.819	0.000
rs78405110 lBF = `29.5365` Chr`18` : `45,329,408`	0.181	0.819	0.000
rs117898212 lBF = `11.208` Chr`18` : `46,947,056`	0.171	0.828	0.000
rs111504720 lBF = `20.4846` Chr`18` : `44,156,753`	0.161	0.838	0.000
rs58280396 lBF = `16.5379` Chr`18` : `55,720,852`	0.159	0.841	0.000
rs117411365 lBF = `26.5974` Chr`18` : `67,468,303`	0.156	0.844	0.000
rs75743047 lBF = `9.47116` Chr`18` : `33,411,351`	0.127	0.873	0.000
rs62095487 lBF = `8.49554` Chr`18` : `10,588,095`	0.127	0.873	0.000
rs117531393 lBF = `17.074` Chr`18` : `25,835,185`	0.122	0.877	0.000
rs78346601 lBF = `13.2849` Chr`18` : `54,574,972`	0.117	0.883	0.000
rs61743415 lBF = `16.7694` Chr`18` : `44,559,844`	0.092	0.907	0.000
rs117576029 lBF = `15.0372` Chr`18` : `33,093,123`	0.089	0.911	0.000
rs72939083 lBF = `14.648` Chr`18` : `62,615,975`	0.088	0.912	0.000
rs16976358 lBF = `1.04673` Chr`18` : `40,191,571`	0.086	0.913	0.000
rs118053201 lBF = `7.94852` Chr`18` : `14,962,250`	0.074	0.926	0.000
rs17088434 lBF = `21.3351` Chr`18` : `71,513,365`	0.062	0.937	0.000
rs117675380 lBF = `13.6306` Chr`18` : `811,672`	0.062	0.938	0.000
rs28645223 lBF = `11.5532` Chr`18` : `75,587,548`	0.061	0.939	0.000
rs4939827 lBF = `66.4426` Chr`18` : `46,453,463`	0.000	0.940	0.060
rs79294993 lBF = `19.4903` Chr`18` : `48,600,991`	0.058	0.941	0.000
rs117242132 lBF = `21.0067` Chr`18` : `45,672,152`	0.053	0.947	0.000
rs79765414 lBF = `2.16441` Chr`18` : `3,325,609`	0.051	0.948	0.000
rs77665194 lBF = `15.0844` Chr`18` : `12,455,794`	0.040	0.960	0.000
rs16964886 lBF = `2.33933` Chr`18` : `31,321,994`	0.031	0.969	0.000
rs78788148 lBF = `0.180442` Chr`18` : `24,866,049`	0.028	0.972	0.000
rs181028361 lBF = `21.8082` Chr`18` : `9,792,830`	0.026	0.973	0.000
rs17666226 lBF = `6.76342` Chr`18` : `49,166,695`	0.025	0.975	0.000
rs6508367 lBF = `0.315355` Chr`18` : `22,971,857`	0.000	0.975	0.025
rs117120368 lBF = `1.98635` Chr`18` : `70,129,472`	0.025	0.975	0.000
rs6650640 lBF = `11.0513` Chr`18` : `31,748,225`	0.025	0.975	0.000
rs1037757 lBF = `5.73579` Chr`18` : `56,752,054`	0.025	0.975	0.000
rs79863952 lBF = `10.9902` Chr`18` : `74,602,869`	0.023	0.977	0.000
rs77307613 lBF = `10.1553` Chr`18` : `66,961,498`	0.022	0.977	0.000
rs72921303 lBF = `15.2522` Chr`18` : `44,560,038`	0.021	0.979	0.000
rs9959639 lBF = `10.7013` Chr`18` : `71,891,450`	0.021	0.979	0.000
rs17056274 lBF = `2.97116` Chr`18` : `72,787,046`	0.018	0.982	0.000
rs78775229 lBF = `15.1154` Chr`18` : `36,175,363`	0.016	0.983	0.000
rs16975050 lBF = `1.76679` Chr`18` : `39,187,170`	0.016	0.984	0.000
rs17656127 lBF = `11.4413` Chr`18` : `47,026,826`	0.011	0.988	0.000
rs118162784 lBF = `12.6345` Chr`18` : `332,259`	0.011	0.988	0.000
rs9959259 lBF = `-0.0831793` Chr`18` : `73,549,963`	0.000	0.989	0.011
rs117320784 lBF = `13.3956` Chr`18` : `58,896,482`	0.011	0.989	0.000
rs117127635 lBF = `12.0334` Chr`18` : `56,130,563`	0.010	0.989	0.000
rs36064717 lBF = `16.1111` Chr`18` : `45,764,569`	0.009	0.991	0.000
rs76888481 lBF = `17.9427` Chr`18` : `67,521,736`	0.007	0.991	0.002
rs117869970 lBF = `11.9593` Chr`18` : `4,405,736`	0.008	0.992	0.000
rs17561091 lBF = `19.659` Chr`18` : `33,053,097`	0.007	0.992	0.000
rs146408330 lBF = `0.056169` Chr`18` : `4,395,500`	0.006	0.993	0.001
rs117504245 lBF = `13.128` Chr`18` : `32,214,484`	0.006	0.994	0.000
rs35735708 lBF = `10.9325` Chr`18` : `72,038,965`	0.005	0.994	0.000
rs111720385 lBF = `5.32077` Chr`18` : `43,373,121`	0.005	0.995	0.000
rs76558737 lBF = `11.0862` Chr`18` : `19,432,268`	0.005	0.995	0.000
rs8096445 lBF = `0.00588351` Chr`18` : `48,713,040`	0.004	0.996	0.000
rs74907094 lBF = `13.9899` Chr`18` : `60,886,937`	0.004	0.996	0.000
rs117149178 lBF = `10.7957` Chr`18` : `6,749,496`	0.004	0.996	0.000
rs10503015 lBF = `0.00963828` Chr`18` : `55,175,143`	0.004	0.996	0.000
rs113568918 lBF = `0.457294` Chr`18` : `67,546,690`	0.003	0.996	0.000
rs7240777 lBF = `-0.0482661` Chr`18` : `71,167,752`	0.004	0.996	0.000
rs1146075 lBF = `0.00363167` Chr`18` : `1,366,301`	0.000	0.996	0.003
rs78395048 lBF = `13.3551` Chr`18` : `50,372,363`	0.003	0.996	0.000
rs1013696 lBF = `0.092336` Chr`18` : `31,420,010`	0.003	0.996	0.000
rs79685532 lBF = `10.6212` Chr`18` : `77,725,683`	0.003	0.997	0.000
rs76637322 lBF = `10.6201` Chr`18` : `31,667,339`	0.003	0.997	0.000
rs11877305 lBF = `0.00431603` Chr`18` : `75,451,077`	0.003	0.997	0.000
rs589398 lBF = `0.0353588` Chr`18` : `5,311,892`	0.000	0.997	0.003
rs7227892 lBF = `-0.0326973` Chr`18` : `46,336,702`	0.000	0.997	0.003
rs12604483 lBF = `0.148485` Chr`18` : `53,855,525`	0.000	0.997	0.003
rs8083786 lBF = `2.85044` Chr`18` : `12,881,361`	0.003	0.997	0.000
rs17492699 lBF = `0.00291966` Chr`18` : `25,480,514`	0.002	0.997	0.000
rs612260 lBF = `9.02876` Chr`18` : `38,534,894`	0.003	0.997	0.000
rs60705247 lBF = `7.77481` Chr`18` : `54,741,103`	0.002	0.997	0.000
rs4800316 lBF = `9.39887` Chr`18` : `26,609,089`	0.002	0.997	0.000
rs118148296 lBF = `8.65957` Chr`18` : `33,640,579`	0.002	0.998	0.000
rs66591657 lBF = `0.188644` Chr`18` : `76,415,450`	0.002	0.998	0.000
rs2469054 lBF = `-0.00717892` Chr`18` : `70,669,246`	0.002	0.998	0.000
rs9952641 lBF = `0.0229198` Chr`18` : `318,040`	0.002	0.998	0.000
rs117131051 lBF = `12.836` Chr`18` : `25,336,648`	0.001	0.998	0.000
rs73435406 lBF = `5.06374` Chr`18` : `46,440,764`	0.002	0.998	0.000
rs116303449 lBF = `0.0012028` Chr`18` : `32,956,931`	0.001	0.998	0.000
rs7407664 lBF = `3.38586` Chr`18` : `9,031,719`	0.001	0.998	0.000
rs549476 lBF = `0.386853` Chr`18` : `55,810,733`	0.000	0.998	0.002
rs77356619 lBF = `8.15839` Chr`18` : `24,027,419`	0.001	0.998	0.000
rs117655798 lBF = `13.1918` Chr`18` : `27,437,530`	0.001	0.998	0.000
rs16977065 lBF = `0.00471124` Chr`18` : `40,437,651`	0.001	0.998	0.001
rs118112887 lBF = `8.10057` Chr`18` : `26,691,296`	0.001	0.999	0.000
rs2576037 lBF = `0.840551` Chr`18` : `44,585,420`	0.001	0.999	0.000
rs6506284 lBF = `0.00043585` Chr`18` : `5,030,023`	0.001	0.999	0.000
rs2243803 lBF = `-0.0734026` Chr`18` : `42,956,672`	0.001	0.999	0.000
rs8083432 lBF = `0.00600591` Chr`18` : `22,731,360`	0.000	0.999	0.001
rs34026507 lBF = `10.4882` Chr`18` : `864,782`	0.000	0.999	0.001
rs9949526 lBF = `0.00125912` Chr`18` : `77,374,321`	0.000	0.999	0.001
rs75000611 lBF = `0.00043597` Chr`18` : `77,328,615`	0.001	0.999	0.000
rs7240382 lBF = `-0.0820825` Chr`18` : `74,450,640`	0.001	0.999	0.000
rs1792738 lBF = `-0.0626607` Chr`18` : `53,845,164`	0.000	0.999	0.001
rs62095459 lBF = `5.05503` Chr`18` : `44,621,382`	0.001	0.999	0.000
rs4800843 lBF = `0.665939` Chr`18` : `25,773,016`	0.001	0.999	0.000
rs2660917 lBF = `0.143926` Chr`18` : `68,628,078`	0.000	0.999	0.001
rs28877609 lBF = `0.0005859` Chr`18` : `2,865,505`	0.001	0.999	0.000
rs403814 lBF = `-0.0540524` Chr`18` : `6,282,593`	0.000	0.999	0.001
rs7238309 lBF = `0.00002807` Chr`18` : `55,145,692`	0.001	0.999	0.000
rs2339345 lBF = `0.105165` Chr`18` : `49,957,255`	0.001	0.999	0.000
rs117650759 lBF = `12.6039` Chr`18` : `7,675,399`	0.001	0.999	0.000
rs143037915 lBF = `0.00006957` Chr`18` : `44,973,221`	0.001	0.999	0.000
rs2168303 lBF = `0.00005588` Chr`18` : `58,375,934`	0.001	0.999	0.000
rs9950590 lBF = `0.00003279` Chr`18` : `8,043,661`	0.001	0.999	0.000
rs184167040 lBF = `0` Chr`18` : `39,038,041`	0.001	0.999	0.001
rs190650493 lBF = `0` Chr`18` : `30,625,009`	0.001	0.999	0.001
rs9948784 lBF = `0` Chr`18` : `72,897,161`	0.001	0.999	0.001
rs148187869 lBF = `0` Chr`18` : `25,261,838`	0.001	0.999	0.001
rs190343823 lBF = `0` Chr`18` : `33,835,336`	0.001	0.999	0.001
rs192178588 lBF = `0` Chr`18` : `25,223,007`	0.001	0.999	0.001
rs148138116 lBF = `0` Chr`18` : `53,201,480`	0.001	0.999	0.001
rs145717157 lBF = `0` Chr`18` : `26,713,277`	0.001	0.999	0.001
rs138098194 lBF = `0` Chr`18` : `64,507,408`	0.001	0.999	0.001
rs141475580 lBF = `0` Chr`18` : `5,936,481`	0.001	0.999	0.001
rs146111930 lBF = `0` Chr`18` : `25,262,370`	0.001	0.999	0.001
rs116989867 lBF = `0` Chr`18` : `77,172,316`	0.001	0.999	0.001
rs75433892 lBF = `0` Chr`18` : `11,712,922`	0.001	0.999	0.001
rs141318925 lBF = `0` Chr`18` : `6,623,040`	0.001	0.999	0.001
rs148133787 lBF = `0` Chr`18` : `25,227,459`	0.001	0.999	0.001
rs7239883 lBF = `-0.0798279` Chr`18` : `40,147,671`	0.000	0.999	0.001
rs1893217 lBF = `16.5233` Chr`18` : `12,809,340`	0.001	0.999	0.000
rs77741790 lBF = `-0.00001874` Chr`18` : `6,894,475`	0.000	0.999	0.001
rs76752096 lBF = `-0.0000229` Chr`18` : `25,137,059`	0.000	0.999	0.001
rs9953852 lBF = `-0.0000316` Chr`18` : `33,097,960`	0.001	0.999	0.000
rs7243299 lBF = `-0.00003336` Chr`18` : `7,755,771`	0.001	0.999	0.000
rs1942771 lBF = `-0.0671424` Chr`18` : `71,211,745`	0.000	0.999	0.001
rs2542151 lBF = `13.7217` Chr`18` : `12,779,947`	0.001	0.999	0.000
rs17650376 lBF = `5.4549` Chr`18` : `3,864,912`	0.001	0.999	0.000
rs8098064 lBF = `-0.00017223` Chr`18` : `8,209,269`	0.001	0.999	0.000
rs2847297 lBF = `3.35859` Chr`18` : `12,797,694`	0.001	0.999	0.000
rs34777351 lBF = `-0.0625803` Chr`18` : `23,106,223`	0.000	0.999	0.001
rs12455924 lBF = `-0.0341717` Chr`18` : `11,064,409`	0.001	0.999	0.000
rs17512836 lBF = `1.35567` Chr`18` : `53,194,961`	0.001	0.999	0.000
rs9966832 lBF = `0.0219014` Chr`18` : `23,405,188`	0.001	0.999	0.000
rs7237497 lBF = `11.9138` Chr`18` : `12,777,325`	0.000	0.999	0.001
rs78289709 lBF = `16.6994` Chr`18` : `27,498,046`	0.001	0.999	0.000
rs77090108 lBF = `11.3929` Chr`18` : `56,080,241`	0.001	0.999	0.000
rs12956009 lBF = `1.37696` Chr`18` : `44,768,024`	0.000	0.999	0.001
rs62096462 lBF = `5.38029` Chr`18` : `44,625,179`	0.001	0.999	0.000
rs1351435 lBF = `0.186306` Chr`18` : `49,404,964`	0.000	0.999	0.001
rs77990856 lBF = `-0.0225233` Chr`18` : `48,016,887`	0.001	0.999	0.000
rs12965577 lBF = `-0.0398172` Chr`18` : `31,675,680`	0.000	0.999	0.001
rs2847278 lBF = `11.9236` Chr`18` : `12,778,715`	0.000	0.999	0.001
rs4799964 lBF = `0.704227` Chr`18` : `27,985,479`	0.001	0.999	0.000
rs681383 lBF = `-0.0461021` Chr`18` : `8,323,984`	0.000	0.999	0.001
rs9952991 lBF = `11.7356` Chr`18` : `12,780,464`	0.000	0.999	0.001
rs78493974 lBF = `9.40232` Chr`18` : `53,358,425`	0.001	0.999	0.000
rs8083633 lBF = `0.0866349` Chr`18` : `3,522,006`	0.001	0.999	0.000
rs613872 lBF = `11.527` Chr`18` : `53,210,302`	0.001	0.999	0.000
rs60241046 lBF = `0.389149` Chr`18` : `31,390,868`	0.001	0.999	0.000
rs142429341 lBF = `-0.08346` Chr`18` : `31,441,920`	0.001	0.999	0.000
rs8091180 lBF = `-0.0776858` Chr`18` : `77,164,243`	0.001	0.999	0.000
rs307120 lBF = `0.849388` Chr`18` : `37,619,939`	0.001	0.999	0.000
rs4263037 lBF = `-0.0181179` Chr`18` : `60,016,233`	0.001	0.999	0.000
rs4800148 lBF = `0.137038` Chr`18` : `20,724,328`	0.001	0.999	0.000
rs16958432 lBF = `2.3429` Chr`18` : `44,631,773`	0.001	0.999	0.000
rs16958440 lBF = `2.3429` Chr`18` : `44,632,884`	0.001	0.999	0.000
rs72881251 lBF = `-0.00308421` Chr`18` : `22,674,660`	0.000	0.999	0.001
rs9675861 lBF = `-0.00714888` Chr`18` : `7,172,523`	0.001	0.999	0.000
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rs4570936 lBF = `-0.0617298` Chr`18` : `36,738,196`	0.000	1.000	0.000
rs62094879 lBF = `-0.0837516` Chr`18` : `55,496,305`	0.000	1.000	0.000
rs2187324 lBF = `-0.0884729` Chr`18` : `55,491,965`	0.000	1.000	0.000
rs1865721 lBF = `-0.105425` Chr`18` : `73,192,446`	0.000	1.000	0.000
rs8098701 lBF = `1.45811` Chr`18` : `43,551,013`	0.000	1.000	0.000
rs9304270 lBF = `1.42842` Chr`18` : `39,937,509`	0.000	1.000	0.000
rs1346987 lBF = `0.787418` Chr`18` : `40,102,641`	0.000	1.000	0.000
rs12606301 lBF = `0.465056` Chr`18` : `40,023,782`	0.000	1.000	0.000
rs4796995 lBF = `0.417505` Chr`18` : `13,708,574`	0.000	1.000	0.000
rs4130047 lBF = `0.12744` Chr`18` : `40,678,235`	0.000	1.000	0.000
rs7506840 lBF = `0.11647` Chr`18` : `6,522,756`	0.000	1.000	0.000
rs1452787 lBF = `0.102049` Chr`18` : `53,207,207`	0.000	1.000	0.000
rs7240405 lBF = `0.0955091` Chr`18` : `47,159,090`	0.000	1.000	0.000
rs12456492 lBF = `0.0943272` Chr`18` : `40,673,380`	0.000	1.000	0.000
rs2187375 lBF = `0.0745483` Chr`18` : `47,172,283`	0.000	1.000	0.000
rs509477 lBF = `0.0730442` Chr`18` : `32,559,295`	0.000	1.000	0.000
rs1805081 lBF = `0.0703408` Chr`18` : `21,140,432`	0.000	1.000	0.000
rs357894 lBF = `0.0370841` Chr`18` : `46,579,970`	0.000	1.000	0.000
rs11082304 lBF = `0.0118008` Chr`18` : `20,720,973`	0.000	1.000	0.000
rs1704734 lBF = `0.0103991` Chr`18` : `66,314,072`	0.000	1.000	0.000
rs72926932 lBF = `-0.00277141` Chr`18` : `53,050,646`	0.000	1.000	0.000
rs62096106 lBF = `-0.0161061` Chr`18` : `59,838,919`	0.000	1.000	0.000
rs4327120 lBF = `-0.0185945` Chr`18` : `36,532,976`	0.000	1.000	0.000
rs1539893 lBF = `-0.0278756` Chr`18` : `66,544,755`	0.000	1.000	0.000
rs7505784 lBF = `-0.0300839` Chr`18` : `27,184,881`	0.000	1.000	0.000
rs9807334 lBF = `-0.0439374` Chr`18` : `48,524,161`	0.000	1.000	0.000
rs7236632 lBF = `-0.0485542` Chr`18` : `55,434,202`	0.000	1.000	0.000
rs7228085 lBF = `-0.0640051` Chr`18` : `47,160,814`	0.000	1.000	0.000
rs7228133 lBF = `-0.0646677` Chr`18` : `4,539,085`	0.000	1.000	0.000
rs2717128 lBF = `-0.071274` Chr`18` : `74,987,632`	0.000	1.000	0.000
rs9951026 lBF = `-0.109832` Chr`18` : `47,109,693`	0.000	1.000	0.000
rs11876140 lBF = `5.99029` Chr`18` : `44,510,156`	0.000	1.000	0.000
rs7240004 lBF = `0.792219` Chr`18` : `46,395,022`	0.000	1.000	0.000
rs7231412 lBF = `0.776366` Chr`18` : `40,105,657`	0.000	1.000	0.000
rs8092503 lBF = `0.672041` Chr`18` : `52,479,487`	0.000	1.000	0.000
rs17697518 lBF = `0.615094` Chr`18` : `38,765,659`	0.000	1.000	0.000
rs150664883 lBF = `0.43826` Chr`18` : `35,146,206`	0.000	1.000	0.000
rs8090196 lBF = `0.155151` Chr`18` : `40,075,956`	0.000	1.000	0.000
rs7231996 lBF = `0.139196` Chr`18` : `71,266,519`	0.000	1.000	0.000
rs7235528 lBF = `0.136261` Chr`18` : `40,058,882`	0.000	1.000	0.000
rs7241918 lBF = `0.132748` Chr`18` : `47,160,953`	0.000	1.000	0.000
rs12959200 lBF = `0.0912698` Chr`18` : `71,267,054`	0.000	1.000	0.000
rs7506045 lBF = `0.0511143` Chr`18` : `11,987,272`	0.000	1.000	0.000
rs12458491 lBF = `0.0419281` Chr`18` : `35,307,820`	0.000	1.000	0.000
rs8097810 lBF = `0.0150825` Chr`18` : `23,785,648`	0.000	1.000	0.000
rs17086172 lBF = `0.0126079` Chr`18` : `70,227,021`	0.000	1.000	0.000
rs10460009 lBF = `0.00915213` Chr`18` : `2,948,029`	0.000	1.000	0.000
rs58263042 lBF = `-0.00749228` Chr`18` : `29,979,575`	0.000	1.000	0.000
rs8088420 lBF = `-0.0330147` Chr`18` : `56,511,908`	0.000	1.000	0.000
rs4553720 lBF = `-0.0567951` Chr`18` : `62,170,726`	0.000	1.000	0.000
rs28498503 lBF = `-0.058068` Chr`18` : `76,662,955`	0.000	1.000	0.000
rs11080466 lBF = `-0.0642206` Chr`18` : `10,899,028`	0.000	1.000	0.000
rs1662342 lBF = `-0.0862485` Chr`18` : `3,255,301`	0.000	1.000	0.000
rs17073641 lBF = `-0.0984909` Chr`18` : `62,418,444`	0.000	1.000	0.000
rs62100765 lBF = `5.27252` Chr`18` : `50,735,418`	0.000	1.000	0.000
rs2345595 lBF = `4.1268` Chr`18` : `1,818,385`	0.000	1.000	0.000
rs489693 lBF = `3.18069` Chr`18` : `57,882,787`	0.000	1.000	0.000
rs16949825 lBF = `0.945855` Chr`18` : `46,227,444`	0.000	1.000	0.000
rs7243817 lBF = `0.276956` Chr`18` : `22,132,494`	0.000	1.000	0.000
rs11877878 lBF = `0.22366` Chr`18` : `23,764,235`	0.000	1.000	0.000
rs1787200 lBF = `0.113827` Chr`18` : `46,587,654`	0.000	1.000	0.000
rs621636 lBF = `0.0511779` Chr`18` : `322,522`	0.000	1.000	0.000
rs7226835 lBF = `0.0320584` Chr`18` : `37,165,305`	0.000	1.000	0.000
rs10514168 lBF = `0.0067863` Chr`18` : `73,098,949`	0.000	1.000	0.000
rs12955474 lBF = `-0.0227347` Chr`18` : `57,152,038`	0.000	1.000	0.000
rs16951095 lBF = `-0.0255469` Chr`18` : `7,042,911`	0.000	1.000	0.000
rs11082321 lBF = `-0.0346267` Chr`18` : `20,776,651`	0.000	1.000	0.000
rs8098600 lBF = `-0.041373` Chr`18` : `10,592,713`	0.000	1.000	0.000
rs17084405 lBF = `-0.0420614` Chr`18` : `69,096,398`	0.000	1.000	0.000
rs8092443 lBF = `-0.0494088` Chr`18` : `68,142,414`	0.000	1.000	0.000
rs2137289 lBF = `-0.0534433` Chr`18` : `44,752,125`	0.000	1.000	0.000
rs1398217 lBF = `-0.0536648` Chr`18` : `44,752,238`	0.000	1.000	0.000
rs2162440 lBF = `-0.070034` Chr`18` : `35,214,006`	0.000	1.000	0.000
rs8090011 lBF = `-0.0802689` Chr`18` : `7,068,462`	0.000	1.000	0.000
rs17440727 lBF = `-0.0826275` Chr`18` : `6,990,995`	0.000	1.000	0.000
rs10502386 lBF = `-0.101582` Chr`18` : `8,966,144`	0.000	1.000	0.000
rs6506122 lBF = `-0.104083` Chr`18` : `3,394,449`	0.000	1.000	0.000
rs10871777 lBF = `10.7023` Chr`18` : `57,851,763`	0.000	1.000	0.000
rs41452747 lBF = `6.20014` Chr`18` : `52,918,380`	0.000	1.000	0.000
rs62100766 lBF = `5.58248` Chr`18` : `50,737,358`	0.000	1.000	0.000
rs7230711 lBF = `1.57411` Chr`18` : `48,690,619`	0.000	1.000	0.000
rs12606068 lBF = `1.37012` Chr`18` : `65,191,491`	0.000	1.000	0.000
rs17773430 lBF = `0.194865` Chr`18` : `57,963,117`	0.000	1.000	0.000
rs7244245 lBF = `0.145515` Chr`18` : `8,931,652`	0.000	1.000	0.000
rs7226371 lBF = `0.0494513` Chr`18` : `1,850,771`	0.000	1.000	0.000
rs17088339 lBF = `-0.0172204` Chr`18` : `71,476,133`	0.000	1.000	0.000
rs12185468 lBF = `-0.0310759` Chr`18` : `8,479,685`	0.000	1.000	0.000
rs4800451 lBF = `-0.0407049` Chr`18` : `20,716,805`	0.000	1.000	0.000
rs12957516 lBF = `-0.0462702` Chr`18` : `35,215,517`	0.000	1.000	0.000
rs2298574 lBF = `-0.0474444` Chr`18` : `25,569,058`	0.000	1.000	0.000
rs473976 lBF = `-0.0567698` Chr`18` : `40,418,431`	0.000	1.000	0.000
rs56728521 lBF = `-0.0617335` Chr`18` : `1,984,421`	0.000	1.000	0.000
rs62097350 lBF = `-0.0665892` Chr`18` : `13,298,943`	0.000	1.000	0.000
rs17184557 lBF = `-0.0772357` Chr`18` : `67,142,857`	0.000	1.000	0.000
rs7227483 lBF = `-0.0802931` Chr`18` : `43,187,130`	0.000	1.000	0.000
rs17750015 lBF = `-0.0913326` Chr`18` : `54,397,622`	0.000	1.000	0.000
rs1420956 lBF = `-0.0952534` Chr`18` : `25,167,945`	0.000	1.000	0.000
rs11152213 lBF = `10.5482` Chr`18` : `57,852,948`	0.000	1.000	0.000
rs7237422 lBF = `7.61091` Chr`18` : `69,334,652`	0.000	1.000	0.000
rs1631486 lBF = `4.08365` Chr`18` : `53,026,357`	0.000	1.000	0.000
rs7229639 lBF = `1.53483` Chr`18` : `46,450,976`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0333

log Bayes Factor = 38.671

contains 2 variants

0.1381

Cluster X0335

log Bayes Factor = 12.3689

contains 1 variants

0.1016

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.9620

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.8983

Cluster X0220

log Bayes Factor = 142.284

contains 7 variants

0.8631

Cluster X0180

log Bayes Factor = 410.88

contains 15 variants

0.8490

Cluster X0327

log Bayes Factor = 118.248

contains 3 variants

0.8311

Cluster X0071

log Bayes Factor = 131.269

contains 6 variants

0.8283

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.8093

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.8092

Cluster X0052

log Bayes Factor = 654.387

contains 25 variants

0.8082

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.8067

Cluster X0155

log Bayes Factor = 348.568

contains 12 variants

0.7946

Cluster X0229

log Bayes Factor = 347.165

contains 13 variants

0.7919

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.7900

Cluster X0146

log Bayes Factor = 686.343

contains 22 variants

0.7752

Cluster X0124

log Bayes Factor = 336.468

contains 13 variants

0.7555

Cluster X0001

log Bayes Factor = 167.541

contains 7 variants

0.7462

Cluster X0150

log Bayes Factor = 861.091

contains 26 variants

0.7349

Cluster X0070

log Bayes Factor = 421.182

contains 15 variants

0.7247

Cluster X0210

log Bayes Factor = 426.159

contains 17 variants

0.7232

Cluster X0033

log Bayes Factor = 379.444

contains 13 variants

0.7203

Cluster X0029

log Bayes Factor = 709.102

contains 23 variants

0.7157

Cluster X0133

log Bayes Factor = 224.204

contains 11 variants

0.7054

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.7014

Cluster X0117

log Bayes Factor = 453.246

contains 21 variants

0.6996

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6996

Cluster X0174

log Bayes Factor = 214.209

contains 8 variants

0.6978

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.6847

Cluster X0214

log Bayes Factor = 186.582

contains 8 variants

0.6815

Cluster X0201

log Bayes Factor = 368.049

contains 13 variants

0.6788

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.6784

Cluster X0122

log Bayes Factor = 219.114

contains 9 variants

0.6752

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.6744

Cluster X0082

log Bayes Factor = 496.905

contains 17 variants

0.6725

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.6601

Cluster X0005

log Bayes Factor = 282.915

contains 11 variants

0.6565

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.6462

Cluster X0222

log Bayes Factor = 431.582

contains 17 variants

0.6461

Cluster X0030

log Bayes Factor = 216.364

contains 9 variants

0.6460

Cluster X0085

log Bayes Factor = 138.902

contains 6 variants

0.6408

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.6368

Cluster X0277

log Bayes Factor = 726.213

contains 23 variants

0.6355

Cluster X0166

log Bayes Factor = 230.746

contains 8 variants

0.6298

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.6272

Cluster X0020

log Bayes Factor = 557.721

contains 18 variants

0.6270

Cluster X0077

log Bayes Factor = 571.533

contains 17 variants

0.6258

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.6212

Cluster X0014

log Bayes Factor = 131.677

contains 6 variants

0.6172

Cluster X0256

log Bayes Factor = 211.588

contains 9 variants

0.6106

Cluster X0039

log Bayes Factor = 463.231

contains 17 variants

0.6064

Cluster X0110

log Bayes Factor = 721.325

contains 13 variants

0.6042

Cluster X0163

log Bayes Factor = 122.554

contains 6 variants

0.5976

Cluster X0274

log Bayes Factor = 454.783

contains 18 variants

0.5947

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.5900

Cluster X0165

log Bayes Factor = 303.727

contains 12 variants

0.5833

Cluster X0267

log Bayes Factor = 92.4806

contains 5 variants

0.5723

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.5722

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.5615

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.5604

Cluster X0075

log Bayes Factor = 431.344

contains 16 variants

0.5596

Cluster X0157

log Bayes Factor = 172.957

contains 8 variants

0.5550

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.5508

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.5489

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.5479

Cluster X0184

log Bayes Factor = 188.416

contains 8 variants

0.5473

Cluster X0043

log Bayes Factor = 517.108

contains 20 variants

0.5469

Cluster X0028

log Bayes Factor = 120.445

contains 7 variants

0.5359

Cluster X0315

log Bayes Factor = 42.686

contains 2 variants

0.5314

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.5270

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.5267

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.5259

Cluster X0203

log Bayes Factor = 363.522

contains 11 variants

0.5171

Cluster X0081

log Bayes Factor = 278.568

contains 10 variants

0.5129

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.5046

Cluster X0091

log Bayes Factor = 303.64

contains 12 variants

0.4945

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.4843

Cluster X0237

log Bayes Factor = 123.902

contains 6 variants

0.4746

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.4744

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.4737

Cluster X0213

log Bayes Factor = 405.918

contains 15 variants

0.4604

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.4510

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.4460

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.4450

Cluster X0169

log Bayes Factor = 331.98

contains 16 variants

0.4428

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.4426

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.4369

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.4351

Cluster X0055

log Bayes Factor = 274.911

contains 10 variants

0.4212

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.4159

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.4143

Cluster X0224

log Bayes Factor = 278.692

contains 11 variants

0.4125

Cluster X0050

log Bayes Factor = 397.79

contains 16 variants

0.3874

Cluster X0057

log Bayes Factor = 439.35

contains 16 variants

0.3826

Cluster X0137

log Bayes Factor = 120.748

contains 4 variants

0.3781

Cluster X0209

log Bayes Factor = 214.798

contains 8 variants

0.3770

Cluster X0142

log Bayes Factor = 295.63

contains 12 variants

0.3673

Cluster X0026

log Bayes Factor = 232.119

contains 9 variants

0.3580

Cluster X0021

log Bayes Factor = 338.631

contains 13 variants

0.3543

Cluster X0095

log Bayes Factor = 179.348

contains 8 variants

0.3531

Cluster X0051

log Bayes Factor = 376.793

contains 14 variants

0.3414

Cluster X0167

log Bayes Factor = 136.48

contains 6 variants

0.3259

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.3178

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.3162

Cluster X0069

log Bayes Factor = 519.392

contains 20 variants

0.3106

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.3082

Cluster X0249

log Bayes Factor = 244.457

contains 11 variants

0.3079

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.2995

Cluster X0182

log Bayes Factor = 91.4459

contains 4 variants

0.2961

Cluster X0089

log Bayes Factor = 308.747

contains 13 variants

0.2898

Cluster X0152

log Bayes Factor = 331.156

contains 10 variants

0.2797

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.2610

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.2568

Cluster X0170

log Bayes Factor = 264.081

contains 11 variants

0.2318

Cluster X0015

log Bayes Factor = 356.23

contains 15 variants

0.2302

Cluster X0118

log Bayes Factor = 91.1908

contains 5 variants

0.2234

Cluster X0123

log Bayes Factor = 382.779

contains 14 variants

0.2190

Cluster X0271

log Bayes Factor = 256.743

contains 10 variants

0.2169

Cluster X0153

log Bayes Factor = 328.394

contains 11 variants

0.1934

Cluster X0080

log Bayes Factor = 455.123

contains 21 variants

0.1663

Cluster X0138

log Bayes Factor = 43.7891

contains 4 variants

0.1603

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.1603

Cluster X0148

log Bayes Factor = 315.237

contains 11 variants

0.1460

Cluster X0042

log Bayes Factor = 307.243

contains 12 variants

0.1292

Cluster X0171

log Bayes Factor = 291.293

contains 14 variants

0.1270

Cluster X0083

log Bayes Factor = 351.917

contains 13 variants

0.1160

Cluster X0064

log Bayes Factor = 166.06

contains 10 variants

0.1076

Cluster X0283

log Bayes Factor = 162.98

contains 9 variants

0.0851

Cluster X0141

log Bayes Factor = 742.063

contains 30 variants

0.0851

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.0835

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.0828

Cluster X0053

log Bayes Factor = 218.825

contains 12 variants

0.0703

Cluster X0119

log Bayes Factor = 114.358

contains 6 variants

0.0634

Cluster X0140

log Bayes Factor = 164.536

contains 8 variants

0.0599

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.0579

Cluster X0284

log Bayes Factor = 192.532

contains 9 variants

0.0541

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)